Transcript Information: R_Transcript_85624.p1


Annotated TAIR IDAT3G55646.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20645087-20646148 | Forward length=146
E-Value3.2E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9874692016386
Replicate 25.942349174424
Replicate 310.516929839743
Condition 2: 8 Hour
Replicate 120.327887880732
Replicate 235.721157155102
Replicate 329.11107363647
Condition 3: 24 Hour
Replicate 114.005706296146
Replicate 27.2130406434592
Replicate 310.875023083427


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85624.p1 GENE.R_Transcript_85624~~R_Transcript_85624.p1 ORF type:complete len:159 (+),score=46.74 R_Transcript_85624:417-893(+)
ATGGAAAAGAACTCATCAAAGGGAAAGCATGTACAATCATCATCTTCTTCTACTAGTTCATATTCTTCTTCATCTGGTGGTTCAGTCATTGCTGACCTTTTTGGCCCGAAAAATTCATCAACTTCCTCATCTTTTTCTCATTCTTCTTCATCTTCCTCCAGCATCTTTGGCTCTGTCTTTGGCCCGCCACCAACGGCAAGAGGTAGAGACTCCACAAGCCAAGCTGGGAATGTCAGGCATGGTGCTCCTGACAACATGGGGCAAAATGGCCAAGGAGAGAAGGGCAGGAGCTCATATTATCAACAAGAAACAATTGATCAGCCTTGCTACTACAGCTCTTCAATCTATTATGGTGGCCAAGAAGTTTATTCTCCAACTATCCCCAACACCGAATCTCAGTTCAAGAAAAATGAGCAAGATGATGATCCCAACAGTGCTTCAAGAGGGAATTGGTGGCAAGGATCACTCTATTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85624.p1 GENE.R_Transcript_85624~~R_Transcript_85624.p1 ORF type:complete len:159 (+),score=46.74 R_Transcript_85624:417-893(+)
MEKNSSKGKHVQSSSSSTSSYSSSSGGSVIADLFGPKNSSTSSSFSHSSSSSSSIFGSVFGPPPTARGRDSTSQAGNVRHGAPDNMGQNGQGEKGRSSYYQQETIDQPCYYSSSIYYGGQEVYSPTIPNTESQFKKNEQDDDPNSASRGNWWQGSLYY*

Click here to download the sequence:
Link to NCBI Protein BLAST