Transcript Information: R_Transcript_85656.p1


Annotated TAIR IDAT2G37230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15637177-15639450 | Reverse length=757
E-Value9.2E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.297589982233
Replicate 210.305719756269
Replicate 315.582179953391
Condition 2: 8 Hour
Replicate 115.359768643078
Replicate 213.707994774332
Replicate 326.469558460686
Condition 3: 24 Hour
Replicate 126.277571612973
Replicate 220.438172699007
Replicate 325.85512977271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85656.p1 GENE.R_Transcript_85656~~R_Transcript_85656.p1 ORF type:complete len:491 (+),score=89.52,PPR_2|PF13041.2|73,PPR_2|PF13041.2|0.086,PPR_2|PF13041.2|7.5e-05,PPR_2|PF13041.2|7.7e-07,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|1.6e-20,PPR_2|PF13041.2|9.5e-20,PPR_2|PF13041.2|1.6e-06,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|12,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|2.7e-15,PPR_1|PF12854.3|4.8e-11,PPR_1|PF12854.3|5.7e-09,PPR_1|PF12854.3|0.64,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|1.5e+02,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.0003,PPR|PF01535.16|0.55,PPR|PF01535.16|0.045,PPR|PF01535.16|1e-10,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.038,PPR|PF01535.16|0.043,PPR|PF01535.16|2.5e+03,PPR_3|PF13812.2|6.8e+03,PPR_3|PF13812.2|9.4,PPR_3|PF13812.2|0.78,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|1.9e-06,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|1.2e+03 R_Transcript_85656:390-1862(+)
ATGGCACAAATTTCTGGCTCAAAGATTCAACATTTAAGACCTATGGTTACTGTAGGGTTTTACACCAGATCACCAGTCAATGTCATCAACAACTTCTGTTCATCAACTTCTACGGATGACCAGTTACCCGGGTCGAGTTCTTCAGTCGACCCGAATCCAAATACGGGTGAAGAACCACCAAAATCTGAGACCCCTAATGGGCCACAACCCGAAACAGAGCAAAAACAAAGGATCCCAAGAGGTAAGCATCGAGACCCAGAAAAATTAGAGGATATAATTGTTAGAATGATGGCTAATAGGGCTTGGACTACCCGTTTACAGAATTCTATTCGAAATTTAGTGCCCCAATTTGATCAAAATCTTGTCTTTAATGTGCTGAACAATGCCAAGAACTCTGAACATGCCCTTCAGTTTTTTAGGTGGGTTGAAAGGTCTGGTTTATTTAAACATGATAGAGAAACCCATATAAAGATTATTGAGAGATTAGGGAGAGGTTTAAAGCTTAATCATGCTAGGTGTATTTTGATGGATATGCCCAATAAGGGTGTTGAATGGGATGAAGATATGTTTGTTGTGTTGATTGATAGTTATGGTCAAAAGGGTATTGTTCAGGAATCTGTGAAAATATTCCAGCAAATGAAGGAACTTGGTGTGCAAAGATCTGAGAAATCTTATGATGCTTTGTTTAAGGTCATACTTCGTCGTGGGCGGTATATGATGGCTAAGAGGTACTATAATAAGATGTTGGAAGAAGGGATTGCTCCTACTAAGCATACCTTTAATGTGCTCTTGTGGGGTTTCTTTCTTTGTCAGAAACTCGATACTGCAAGTAGGTTTTATGAGGATATGAGAAGTAGAGGGATTATGCCTGACGTGGTTACGTATAACACGTTGATTAATGGGTATTGTCGGGTTAAGAAGATTGAGGAGGCCGAGAAGTTTTTTGTGGAGATGAAGGGGAAGAATATTGCTCCTAATGTTATTAGCTATACTACTATGATTAAGGGCTACGTTTCAATGGGTAAAGTGGATGATGCTTTTAGGATGTTTGAGGAGATGAAGGGTTTTGGTATCAAGCCAAATGCTGTTACTTACACCACTTTGTTGCCTGGGCTTTGTGATGCGATGAAAATGTCTGAGGCTCAGATGGTGTTGAAGGAGATGGTGGAGAAGCATACTGCTCCCAAGGATAATTCAGTTTTTATTAAGTTGTTAACGTGCCAGTGCAAGTTGGGGAACTTGGATGCAGCTGTTGATGTTCTTAAAGCTATGATTAGACTGGGCATTCCAACAGAGGCTGGACACTATGGGGTTTTAATTGCGAATCTCTGCAAGGCCGAGTCCTATGATCAGGCGCTGAAATTGTTGGATAAGCTTATGGAGAAAGAAATCATCCTGAGGCCACAAAGCACCTTGGAGATGAAGGCCAACGCTTACAATGCAATCATAGAATATCTTTGCGACAGTGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85656.p1 GENE.R_Transcript_85656~~R_Transcript_85656.p1 ORF type:complete len:491 (+),score=89.52,PPR_2|PF13041.2|73,PPR_2|PF13041.2|0.086,PPR_2|PF13041.2|7.5e-05,PPR_2|PF13041.2|7.7e-07,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|1.6e-20,PPR_2|PF13041.2|9.5e-20,PPR_2|PF13041.2|1.6e-06,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|12,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|2.7e-15,PPR_1|PF12854.3|4.8e-11,PPR_1|PF12854.3|5.7e-09,PPR_1|PF12854.3|0.64,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|1.5e+02,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.0003,PPR|PF01535.16|0.55,PPR|PF01535.16|0.045,PPR|PF01535.16|1e-10,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.038,PPR|PF01535.16|0.043,PPR|PF01535.16|2.5e+03,PPR_3|PF13812.2|6.8e+03,PPR_3|PF13812.2|9.4,PPR_3|PF13812.2|0.78,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|1.9e-06,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|1.2e+03 R_Transcript_85656:390-1862(+)
MAQISGSKIQHLRPMVTVGFYTRSPVNVINNFCSSTSTDDQLPGSSSSVDPNPNTGEEPPKSETPNGPQPETEQKQRIPRGKHRDPEKLEDIIVRMMANRAWTTRLQNSIRNLVPQFDQNLVFNVLNNAKNSEHALQFFRWVERSGLFKHDRETHIKIIERLGRGLKLNHARCILMDMPNKGVEWDEDMFVVLIDSYGQKGIVQESVKIFQQMKELGVQRSEKSYDALFKVILRRGRYMMAKRYYNKMLEEGIAPTKHTFNVLLWGFFLCQKLDTASRFYEDMRSRGIMPDVVTYNTLINGYCRVKKIEEAEKFFVEMKGKNIAPNVISYTTMIKGYVSMGKVDDAFRMFEEMKGFGIKPNAVTYTTLLPGLCDAMKMSEAQMVLKEMVEKHTAPKDNSVFIKLLTCQCKLGNLDAAVDVLKAMIRLGIPTEAGHYGVLIANLCKAESYDQALKLLDKLMEKEIILRPQSTLEMKANAYNAIIEYLCDSG*

Click here to download the sequence:
Link to NCBI Protein BLAST