Transcript Information: R_Transcript_85745.p1


Annotated TAIR IDAT1G18910.1
Annotated Gene Namezinc ion binding;zinc ion binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6532706-6537993 | Reverse length=1254
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3525549328793
Replicate 24.4512156882552
Replicate 36.4138865269227
Condition 2: 8 Hour
Replicate 15.3673015964361
Replicate 26.6367097304639
Replicate 37.7108041915404
Condition 3: 24 Hour
Replicate 17.6036257538156
Replicate 25.0991758555015
Replicate 37.3192484472985


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85745.p1 GENE.R_Transcript_85745~~R_Transcript_85745.p1 ORF type:complete len:1250 (+),score=211.35,zinc_ribbon_6|PF14599.2|2e+03,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.7e-25,zf-CHY|PF05495.8|2.3e-18,zf-CHY|PF05495.8|2.2e+03,zf-CHY|PF05495.8|3.1e+02,Hemerythrin|PF01814.19|0.00057,Hemerythrin|PF01814.19|3.9e+02,Hemerythrin|PF01814.19|1.1e+03,Hemerythrin|PF01814.19|5.7e-07,Hemerythrin|PF01814.19|0.17,Hemerythrin|PF01814.19|6.5e+03,zf-RING_2|PF13639.2|3.7e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.1e-06,zf-RING_2|PF13639.2|2.3e+02 R_Transcript_85745:211-3960(+)
ATGGGAGGCGACCAATCCCTATCTGAATGCTCTTCTTCTACTCCGACTAGCTCGTCGGCTCCAATGCCGGAATATTCCTTCTCTGGCACCGGAGCTCCGATTCTCTTTCTGGTGTTGCTCCACAAGGCGTTCGGAGCTGAGCTCTACGCGCTTAAGCGCGTGGCTATGGACGCCGGCGAGCGTGGAGAAGTTGAGCAGCGAAAGGCGGTGGTTGAGCTTCAAAATAGGCTTGACTTCTTGAGAAGCGTTTATTCTTATCATTGTGCTGCTGAAGATGAGGTTATTTTTTTTGCTTTGGATGGTCGAATGAAAAACATTGTGTGTACATATGGCCTAGAACACAATAGCATAGATAGTTCGTTTGCTTTTGTCTTTTCTTATCTGGACTGTTTGTCCAGTGACAGAGGATTTGCACATCAGGAATTCCAAGAACTTATATTTCGTATCAGTGCTCTACATGACTCGATTTGCCAGCACATGTTAAAAGAAGAACAACAGATTTTCCCTGAGTTGCTGAGGCAATTCTCTGATGAAGAGCAAGCATCACTAGTTTGGCAATACATGTGTAGTGTCCCTGTTATGCTCATGGAGGACCTGTTTCCATGGATGAAGTGTTTTCTCTCACCAGAAGAACAATTGGATCTGAAGCATTGTATGAATAAAATTGTGCCACAAGATAAAACATTGCATGAGGTGATAATGTCCTGGCTTTATAAGACTACTCGACAGCACCCACTGCTAGGAGGTTGTGTTGCGTGTGACAATTCCTCTTGCTTTCTTGATGAATTAGATAATTTGAAAAATGAATCTGAGCTGCACTTGCCCATGAGCTCTTCTGGTAAAAGCTGTTCGTGGGATTTGGACATGCGGATAGATGTCAAGGACAGTCCATTTAATGGACTTTTTCTTTGGCATGCTGCCATCAGGTCTGAGTTGAAAGAAACTTTAGACAAGCTCTATCAAATAAGGTCAGAGAAATTCTCAAATGTGGCGTCAGTAATTGTTCGAATCAACTTTCTTATTGATGTGTTGATATTTTATAGTAATGCATTGGAAAAGGTCTTTTATCCTTTGATGAAAGAGAACTTTGTACTTCAACTGTCATCCTTTTGCAAATCATTTCCTACCAAAGCTGAAGTCGAAGAACTTCAGAAGATCCTATATGATGCTAATCAGATTACTGTGGCTAATCCCGTTTTGGTGGGGTTGCTATGTAATAAGGTGGAGGCTCTGATATTGGAAACTACCAAACACATGTCTTTCCAAGAAACAGAGGTTTTCCCCCTCATTAGCAAGACATGCAACCACGACAGTCAACAGAAATTACTAGTCCGAAGCCTTCGTATGCTGCCCCTTGGGTTGTTAAAATGTGTGGCTATTTGGTTTTCATCTCGATTGCCTAAGGACAAACTAAGGCCTATTCTCCATGTCATCGAGCACTCTGGCTTTCTAAATAAATCTTTTGGCTCCCTTCTACATGAATGGATCCGCACTGGTTATTCTGGCAAAACTACTATGGAAGACCTACATGAGATGTTCAACAGCAGAATGGCTTATGTATCTGAGCAGATTAAGGAGGGTAAAGATGCCTGCCAAAAGTCGAAGCACGTGATGATTAGACACTGTTCTGTTGACAGCTCTAGAAGCTTTCATTCAGATTCTTTAAGCAAGTGTCTCCAGCCAACTGAGAAGCATGGCACGTTGTATTCAAGTGGAATTAATTCACTCATTTTTTCTTCAAGAGTATCAAATCCACTTCACTCCTTTTCTGAAAGTCCAACTGAAGTAGTTCCCATTAACTACCCAGAAGCGAAGCCAATGGACCACATCTATTATTTTCACAAAGCTCTAAAGAAAGACCTTGAGTCCTTGCTCCATGATGCAGCAAAGCTATCAGAAAACATGGGGCTGCTTCTGGAGTTCAGCCGACACTTCCAGCTTGTGCGATCCTTATATGAACTCCATAGTGAAACAGAGGATGAGATAGCATTTCCAGCATTGGAGGCAAAAGGAAAAGTGCAAAACCTAACACAAAGTTATGCTATTGACCACAAGCTGGAAGCTGAGTGCTTTGCTAGAGTATCAAGAATTATTGATAAACTGTTTGAATTAAATAATCAAGTTTCTAGTGCAGAAGTTGATCCAGGAGATCCAGCATTGATGAAATATCAGAAATTATGTTTTGAGCTCCAAAATAGCTGCAAGTCATTGGAAAATTTACTGAAAAGTCATATCCATCGTGAAGAGGTTCAACTTTGGCCCTTGTTTAGAGAGTGTTTCTCCATAGAGGAGCAAGAGACAATTATAGGACACATGCTTGGAAGAACAAATGCAGGACTTCTACAAGAAATGGTGAAATGGTTCCAGGCCTCGTTAACATCAGAGGAGCAGCATGCTATGATAAATTTCTGGCGCAAAGCTGCAAAATATACAAAGTTTGATGAATGGTTAGGAGAGTGGTGGGAAGGTATGAAAAGCTACGAGTTTACCAGGGCTGGTGACACAAATATTTCTCGTTCATCAGCAATGGACTCCCTGGACATTATCTCAAAGTATATATCTACGAGTGTCATTCATGACCAAGGGGGGGAAATCAATGATAAAATTGTGAAGTTACCTGATAATGATTCCAAGGCTAAAAACATAGATAAGAAGATGGAAGGTCTTGATATGGACAACCAGAAGCACAAATCGTCTGAGTATACAAAGCTCTTCGATGAAAAGGAGGAGAAGCATAGGAGGGAAGAAAAGCTCATGGATTTAGTCAATGAACACAGTCAACTTTCTAATCATGTCATACAATATCAAAACAAACCCTTGGTGATGAGTCAGGTGGAACTGGAGGCTGCAATTAAAAGGGTTTCACAGGACTCCTCTTTGGATCTGCAAGCAAAATCACGGATAATCCAACATTTGATGACTAGCAATTGGGCTGCAGCAAACCCACTGCTTGATTCAGATCAAATAATCACAAGAGAGCCTGGGAAACTTCCAGGTCAGTGTCCCTCATATAGAGATGTAGGAGGCACTGTATTTGGTTGCAAACACTACAAACAGAACTGCAAGCTCATGGCACCCTGTTGCAATCAACTGTTCACTTGTTGGCGCTGCCATGATGATGTTGCTGATCATCTCATGGATAGGAAAGCCATCACCCAGATGATGTGCATGAAATGCTTGGAAGTCCAACCAATTGGAAGCACATGTTCGTCTCCTTCCTGTCATAATTATTCTATGGCAAGATACTATTGCAAAATCTGCCAGTTGTTTGATGATGACAGGGAGATCTACCACTGCCCATATTGTAACATATGCCGAGTTGGAAAAGGTTTGGGGATTGATTATTTCCACTGCATGAAATGCAATGCGTGCATGTCAAGAACTCTTTCAGGGCATACATGCAGGGAGAAGTGCTTTGAGGATAAGTGTCCCATCTGCCATGAGGACATCTTTACTTCAAGCAATCCAATAAAGGCCCTCTCTTGTGGTCATATGATGCACTCAACATGCTTTCAGGATTACACATGCATGCAATATACCTGTCCAGTCTGCAGCAAATCACTTGGTAACATGCAGGTGTATTTTGAAATGTTGGATGCACTTTTGGCCGAGGAGAAGATGCCAGACGAGTACTGTGACCAGACTCAGGCCATATTATGCAATGATTGTGAGAAGAAAGGAACTGCTCCCTTCCACTGGTTGTATCACAAATGCCCATTTTGTGGCTCATACAACACTAGGCTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85745.p1 GENE.R_Transcript_85745~~R_Transcript_85745.p1 ORF type:complete len:1250 (+),score=211.35,zinc_ribbon_6|PF14599.2|2e+03,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.7e-25,zf-CHY|PF05495.8|2.3e-18,zf-CHY|PF05495.8|2.2e+03,zf-CHY|PF05495.8|3.1e+02,Hemerythrin|PF01814.19|0.00057,Hemerythrin|PF01814.19|3.9e+02,Hemerythrin|PF01814.19|1.1e+03,Hemerythrin|PF01814.19|5.7e-07,Hemerythrin|PF01814.19|0.17,Hemerythrin|PF01814.19|6.5e+03,zf-RING_2|PF13639.2|3.7e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.1e-06,zf-RING_2|PF13639.2|2.3e+02 R_Transcript_85745:211-3960(+)
MGGDQSLSECSSSTPTSSSAPMPEYSFSGTGAPILFLVLLHKAFGAELYALKRVAMDAGERGEVEQRKAVVELQNRLDFLRSVYSYHCAAEDEVIFFALDGRMKNIVCTYGLEHNSIDSSFAFVFSYLDCLSSDRGFAHQEFQELIFRISALHDSICQHMLKEEQQIFPELLRQFSDEEQASLVWQYMCSVPVMLMEDLFPWMKCFLSPEEQLDLKHCMNKIVPQDKTLHEVIMSWLYKTTRQHPLLGGCVACDNSSCFLDELDNLKNESELHLPMSSSGKSCSWDLDMRIDVKDSPFNGLFLWHAAIRSELKETLDKLYQIRSEKFSNVASVIVRINFLIDVLIFYSNALEKVFYPLMKENFVLQLSSFCKSFPTKAEVEELQKILYDANQITVANPVLVGLLCNKVEALILETTKHMSFQETEVFPLISKTCNHDSQQKLLVRSLRMLPLGLLKCVAIWFSSRLPKDKLRPILHVIEHSGFLNKSFGSLLHEWIRTGYSGKTTMEDLHEMFNSRMAYVSEQIKEGKDACQKSKHVMIRHCSVDSSRSFHSDSLSKCLQPTEKHGTLYSSGINSLIFSSRVSNPLHSFSESPTEVVPINYPEAKPMDHIYYFHKALKKDLESLLHDAAKLSENMGLLLEFSRHFQLVRSLYELHSETEDEIAFPALEAKGKVQNLTQSYAIDHKLEAECFARVSRIIDKLFELNNQVSSAEVDPGDPALMKYQKLCFELQNSCKSLENLLKSHIHREEVQLWPLFRECFSIEEQETIIGHMLGRTNAGLLQEMVKWFQASLTSEEQHAMINFWRKAAKYTKFDEWLGEWWEGMKSYEFTRAGDTNISRSSAMDSLDIISKYISTSVIHDQGGEINDKIVKLPDNDSKAKNIDKKMEGLDMDNQKHKSSEYTKLFDEKEEKHRREEKLMDLVNEHSQLSNHVIQYQNKPLVMSQVELEAAIKRVSQDSSLDLQAKSRIIQHLMTSNWAAANPLLDSDQIITREPGKLPGQCPSYRDVGGTVFGCKHYKQNCKLMAPCCNQLFTCWRCHDDVADHLMDRKAITQMMCMKCLEVQPIGSTCSSPSCHNYSMARYYCKICQLFDDDREIYHCPYCNICRVGKGLGIDYFHCMKCNACMSRTLSGHTCREKCFEDKCPICHEDIFTSSNPIKALSCGHMMHSTCFQDYTCMQYTCPVCSKSLGNMQVYFEMLDALLAEEKMPDEYCDQTQAILCNDCEKKGTAPFHWLYHKCPFCGSYNTRLL*

Click here to download the sequence:
Link to NCBI Protein BLAST