Transcript Information: R_Transcript_85745.p2


Annotated TAIR IDAT3G47870.1
Annotated Gene NameLOB domain-containing protein 27
Annotated Gene Symbol(s)SCP, LBD27
Annotation TypeOrtholog
Chromosome Positionchr3:17660021-17661007 | Reverse length=328
E-Value3.7E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.084180377444952
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85745.p2 GENE.R_Transcript_85745~~R_Transcript_85745.p2 ORF type:complete len:262 (-),score=48.93,DUF260|PF03195.10|4.1e-39 R_Transcript_85745:5059-5844(-)
ATGACCCTCAGAGGTAACACCAGCCAAGCATGTGCTGCTTGCAAATACCAAAGGAGGAAATGCACTCCTGAGTGCCCTCTTGCACCTTACTTCCCACCTGACCAGCCTAAGATGTTTCAGAATGTCCATAGACTTTTCGGGGTTAAGAAAATCCAAAAGATACTGGAAAGTCTCCACCCTAGCCAACAAAATGAGGCTATGAATTCTATCATCTATCAAGCTAACATCCGTGCTCGTTTCCCTGTTTATGGATGTGTCGAGGTCATCCAACTCCTACAGAACCAAATCCGACAATGCGAAGAGGAGCTTTATGCTGTCACTAGCATGCTTGCTTTGTATCGTCAACAACAACAACAACAACAGGGTCCCAATATCACTTCCCCTTCCCAACTGCAATTGGGAATGGCATTACCAGAAAATAATGAGCCATCCTTTTACCTTCAAAATGCCCAGCATCCGCAACAATACTATTCTGAAAATGGAGTTCCGGTTTCCCAAAACTTGTCGTATTCGAGTAGCAATAGTCCTCATGACTCCAGTTATGTTGATGCCAAAGAAACACTGGTCAATTCAATGTGGATTCAACACCCTTACAGCAATGGTAATAACAACAGTGATAATGACAATCCAATGCTTATAGAATCACAGTTGGTCATGTCACAATCTCAAGCCATTCAACAGGATTCCTTCCATGATTATGAGCAGATGCCCCCTTATGTTGATGCAATTGATGACACACAGTCATCATACATTGATACTAAGGATGCATATGCTTCAAGGTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85745.p2 GENE.R_Transcript_85745~~R_Transcript_85745.p2 ORF type:complete len:262 (-),score=48.93,DUF260|PF03195.10|4.1e-39 R_Transcript_85745:5059-5844(-)
MTLRGNTSQACAACKYQRRKCTPECPLAPYFPPDQPKMFQNVHRLFGVKKIQKILESLHPSQQNEAMNSIIYQANIRARFPVYGCVEVIQLLQNQIRQCEEELYAVTSMLALYRQQQQQQQGPNITSPSQLQLGMALPENNEPSFYLQNAQHPQQYYSENGVPVSQNLSYSSSNSPHDSSYVDAKETLVNSMWIQHPYSNGNNNSDNDNPMLIESQLVMSQSQAIQQDSFHDYEQMPPYVDAIDDTQSSYIDTKDAYASRY*

Click here to download the sequence:
Link to NCBI Protein BLAST