Transcript Information: R_Transcript_85759.p3


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1433101553656
Replicate 21.674551566944
Replicate 32.2485141198677
Condition 2: 8 Hour
Replicate 11.2017602428096
Replicate 20.82309994507432
Replicate 32.1158319128058
Condition 3: 24 Hour
Replicate 14.2253632934425
Replicate 23.2474000820482
Replicate 35.7740570646416


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85759.p3 GENE.R_Transcript_85759~~R_Transcript_85759.p3 ORF type:complete len:163 (+),score=19.12,gag_pre-integrs|PF13976.2|7.3e-10,rve|PF00665.22|1.6e-06 R_Transcript_85759:1517-2005(+)
ATGTTCACTGATTGTTTCTGTGTGATACAGGATCGCACTTTGAGGATGGTGATTGGAGTGGGTAAACGACGTGGTGGGGTCTACTATTTTCTTGGCGCATCAAAGGCTCAAGCAAATCGTGTGAAAACAGTGGACTCTTATGATCTTTGGCATCAGCGAATGGGGCATCCCTCTTCACAATTTTTTCGCTTCCTTACTCATGTGCCTCATAATTGTCTTTCAAATATTAAGAATAAAGTGTGTGATGCATGTTTTAGAGCTAAACAATCTCGTGATATTTTTGAGCTTAGCAAGAGCCGTGCTAGTGAACCTTTTGCTTTAATACATTGTGATGTTTGGGGACCATATCAAGTCGCTTCTTCATCCGGTGCTCATTATTTTTTAACAATAGTTGATGACTTTTCTAGGGCTGTCTGGATTTATTTGATGGGTGAGAAGAGTGAAGTCAAGGTCTTGTTTCCCAAATTTTGTGCCATGGTTTCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85759.p3 GENE.R_Transcript_85759~~R_Transcript_85759.p3 ORF type:complete len:163 (+),score=19.12,gag_pre-integrs|PF13976.2|7.3e-10,rve|PF00665.22|1.6e-06 R_Transcript_85759:1517-2005(+)
MFTDCFCVIQDRTLRMVIGVGKRRGGVYYFLGASKAQANRVKTVDSYDLWHQRMGHPSSQFFRFLTHVPHNCLSNIKNKVCDACFRAKQSRDIFELSKSRASEPFALIHCDVWGPYQVASSSGAHYFLTIVDDFSRAVWIYLMGEKSEVKVLFPKFCAMVST*

Click here to download the sequence:
Link to NCBI Protein BLAST