Transcript Information: R_Transcript_85765.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35966425526539
Replicate 20.20686010262363
Replicate 30.33852321570669
Condition 2: 8 Hour
Replicate 10.48248009748266
Replicate 20.44060850918592
Replicate 30.08941680108565
Condition 3: 24 Hour
Replicate 10.45237058576757
Replicate 20
Replicate 30.86256964283339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85765.p2 GENE.R_Transcript_85765~~R_Transcript_85765.p2 ORF type:complete len:203 (+),score=15.85,gag_pre-integrs|PF13976.2|1.1e-10,rve|PF00665.22|9.3e+03,rve|PF00665.22|2.4e-06 R_Transcript_85765:743-1351(+)
ATGCCACGCAGTCCTTTGATACGCCCCAAGGTGCTGGCATACCTGTTGATCCAACACAGCCACCACAACTCACTGCTGACCAGTGGAAATCCGTGCTCGCCGCGCTCGGGTCTAGTAAGCCTAGTACTTCTACAACTGAGAAACTCACTGGACCACACTTCGAGGATGGTGATTGGAGTGGGTGAACGACGTGGTGGGGTCTACTATTTTCATGATGCATCAAAGGCTCAAGCACATCGTGTGGAAACAGTGGACTCTTATGATCTTTGGCATCAGCGAATGGGGCATCCCTCTTCACAAGTTGTTCGTTTACTTAGTCATGTGCCTCGTAGCTGTTTTTCAAATATTAAGAATAAAGTGTGTGATGCTTGTTTTAGGGCTAAACAATCTCGTGATGTTTTTGAACTTAGCAAGAGTCGTGCTAGTGAACCTTTTGCTTTAATACATTGTGATGTTTGGGGACCATATCAAGTCGCTTCTTCATCCGGTGCTCATTATTTTTTAACAATAGTTGATGACTTTTCTAGGGCTGTCTGGATTTATTTGATGGGTGAGAAGAGTGAAGTCAAGGTCTTGTTTCCCAAATTTTGTGCCATGGTTTCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85765.p2 GENE.R_Transcript_85765~~R_Transcript_85765.p2 ORF type:complete len:203 (+),score=15.85,gag_pre-integrs|PF13976.2|1.1e-10,rve|PF00665.22|9.3e+03,rve|PF00665.22|2.4e-06 R_Transcript_85765:743-1351(+)
MPRSPLIRPKVLAYLLIQHSHHNSLLTSGNPCSPRSGLVSLVLLQLRNSLDHTSRMVIGVGERRGGVYYFHDASKAQAHRVETVDSYDLWHQRMGHPSSQVVRLLSHVPRSCFSNIKNKVCDACFRAKQSRDVFELSKSRASEPFALIHCDVWGPYQVASSSGAHYFLTIVDDFSRAVWIYLMGEKSEVKVLFPKFCAMVST*

Click here to download the sequence:
Link to NCBI Protein BLAST