Transcript Information: R_Transcript_85777.p1


Annotated TAIR IDAT3G49910.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18504311-18504751 | Forward length=146
E-Value8E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1645.31046314063
Replicate 2789.14666530644
Replicate 3694.52605078946
Condition 2: 8 Hour
Replicate 1566.3397334737
Replicate 2548.83035158502
Replicate 3522.56881731618
Condition 3: 24 Hour
Replicate 1826.48106019735
Replicate 2858.95481053439
Replicate 3732.12138738418


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85777.p1 GENE.R_Transcript_85777~~R_Transcript_85777.p1 ORF type:complete len:147 (+),score=11.11,Ribosomal_L26|PF16906.1|3.9e-38,KOW|PF00467.25|8.6e-10 R_Transcript_85777:240-680(+)
ATGAAGTACAACCCAAGAGTGTCAAGCTCACGCCGGAAGAGCCGAAAGGCTCACTTTACAGCCCCATCAAGCGTACGCCGTGTAATAATGAGCGCACCCGTCTCCACCGACATCCGTGGCAAGTACAACGTCCGTTCAATGCCAGTCCGAAAAGACGACGAAGTCCAGGTCGTAAGGGGAACCTACAAAGGCCGTGAGGGCAAAGTGGTCCAAGTGTACCGTAAGAAATGGGTCATCCACATTGAAAGGATCACTCGTGAGAAGGTCAATGGCACCACTGTCAATGTCGGGATTCACCCATCTAAGGTTGTCATCACTAAGCTCCGTCTTGATAAGGACCGCAAGTCGCTTCTTGATCGTAAGGGTAAGGGTAGGGCTGCTGCTGACAAAGATAAGGGTACTAAGTTCACTGCTGAGGATATTATGCAGAGCGTTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85777.p1 GENE.R_Transcript_85777~~R_Transcript_85777.p1 ORF type:complete len:147 (+),score=11.11,Ribosomal_L26|PF16906.1|3.9e-38,KOW|PF00467.25|8.6e-10 R_Transcript_85777:240-680(+)
MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPVSTDIRGKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRKKWVIHIERITREKVNGTTVNVGIHPSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD*

Click here to download the sequence:
Link to NCBI Protein BLAST