Transcript Information: R_Transcript_85793.p1


Annotated TAIR IDAT4G32700.2
Annotated Gene Namehelicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15767440-15779185 | Forward length=2154
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6752948338085
Replicate 21.5094742878136
Replicate 31.7424420063864
Condition 2: 8 Hour
Replicate 11.3174213051393
Replicate 21.2860618498641
Replicate 31.927977194837
Condition 3: 24 Hour
Replicate 12.8963467374469
Replicate 21.7697401614424
Replicate 32.4567831791415


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85793.p1 GENE.R_Transcript_85793~~R_Transcript_85793.p1 ORF type:complete len:2156 (+),score=454.65,DNA_pol_A|PF00476.16|5.8e-118,DEAD|PF00270.25|2.6e-14,Helicase_C|PF00271.27|6.5e-11 R_Transcript_85793:203-6670(+)
ATGGATTCTGGCACACCTCGTTCTCGAATTGACCAGTTCTATGCTTCTAAGAAAAAGAAAGCTTCTTCACCAAAGACTGTGAAAGATTCATCATTATCATCATCTCCTAGGGGGGCAAAAGGGTCTTTGGAGAATTACTTAGTGACTTCTTCACAAAATGATTGTTCATCAACTAAGCAAGGGGGGTCTGTTAAAAGAAATTTGGCCTTGGAGATTGAAAATGGAGAGTCCCTTTTGCCTAATCAAGAGAGGTTTAGGGTTTTGGATTCATCTGTTGCAGTTCCAAGTGAAGTCGCTGGGGCTGGTAATGCTGGGATTGGAGCTGATCATGGTGGCGGTTTGGGACCAGTTCTTGGTCCACATAGCTCGAAGTTCAAGCGATCTTTTGCGGAATTGGGTTCGATGTATTGTGGTGAGATCCCATCAAGTTCGCTTCCAGAGATAAAATCAAATGAACATAAAAGAGAGGGGAGTCCATCAATGCTCATCACAGAAGGTAAAGCATGCAAGAAAAGGCATTGCATTACTAATGAAAAAGAATCACGGATTGATCCTGGGGCTCCTTGTTGTTCTACCAAGAATCATGAGCTAATGCCATGTGATGCTATTGCTCTAAAGCCCGAAGTGGATGCCAATGCTTCAAGAGAAGTAGACTGTGGGAACTGTATCCCTGGGCAGCAAGTGAGCTTAAGGAAATGCAGTAGTACCACTAATTCAACTTCAGTGGTGAATGAGTGCTCAACTCCTGCTGTGTTGTGTAGAACTTCTGGTGCACGTGAAACTCCTGTATCAACTCGTGGAAGTTCTATGTTTTCACCTGGAGAAGCTTTTTGGAACGAGGCAATTCAAGTTGTTGATGGGTTGTTTTCTCAAACTGATACAGATTTTGTGCAGGCTATAGAGAATCCAAATATTGGCAAGATACAGAACCAGGGGAGCTCCCAAAATCTTAGTGTAGGGAGTTCGAAATTTAAATTGAATGTCCCAGTTGTTGATGTTATTAGTTGCTTTAGAAAGACTGACAAGAATATTTCCTTGCATGAGAAGGATGTAAAAAACATGGATATAGAAGCATCCCCTTTGCCGGTTAAGCATTTTGACTTCTCATTCGAAGAAAAAAATTCTAATGAAAGTACACCACGCTATCGTTTTTCTGACAGAACTGAAGATATTAGAGGTGACTTTAAACTCTTAGAGAATAGTTCCACTAGACAAAAGGGACCTCTAACTAGGAATTCTAAACCAGTTGATGTCGAGGTTCAGTTACATAGGGTGGTGCACAAAGTACCAGAAACAACTTCAATTCCTCGAGCAGCTGAGAGGAGACCGAATTTGACTTTGGATAGCGACAGCACCGTTTCTGATTCACCAAATAGGGAAAATATGAACTTTGTTGCTTCAGGTGCTTCCGATGACGGCAGTAGTCCCTCAAGTTTCATCCCACTGGAAAGTCGGTTAGACCTAAGCAACTGGCTTCCACCTGCTGTATGCAACATTTATAGACAAAAAGGAATCACAAATCTCTATCCTTGGCAGATTGATTGTCTTCAAGTGGAAGGTGTTCTGCAGAAGAGAAATCTCGTATATTGTGCATCCACAAGTGCTGGCAAAAGTTTTGTTGCTGAAATCCTGATGTTGCGACGTGTCATAGAGACTGGGAAAATGGCTTTGCTTGTGCTCCCTTACGTCTCAATTTGTGTTGAGAAGGCAGAGCATCTAGAACGCCTTTTGGAACCCCTTTGCAAGCATGTTCGCAGCTATTACGGAAACCAAGGTGGTGGAACGCTCCCTAAAGATACATCTGTGGCTGTATGTACCATAGAAAAAGCCAACTCTTTAATTAACCGATTGCTGGAAGAAGATCGGCTTTCAGAAGTGGGAATTATTGTGATTGATGAGCTGCATATGGTGGCTGATCCCAGTAGGGGCTATCTTTTGGAGCTCTTATTGACAAAGCTTCGTTATGCAATTGGTGAAGGCACTGGTGAGTCCTCCAGTGCAGAAAGTTCAGGCTTTAGTAGTGGCAAGGGTGATGTAGCTCATGGTATGCAAATTGTTGGAATGAGTGCTACAATGCCAAATGTGGCTGCAGTTGCTGATTGGCTTCGTGCAGCACTGTACCAAACTGAATTTCGGCCTGTTCCGTTGGAGGAATATATTAAAGTGGGTAACAATATCTATGACAAGAATATGGAAATTGTAAGGACAATTCCCAAATCAGCCGACCTTGCTGGTAAAGATCCTGATCATGTTGTGCAATTATGCAATGAGGTTGTTCAAGATGGTCACTCAGTACTTATTTTTTGCTCAAGTCGTAAAGGATGTGAATCTACAGCTAGGCATATATCAATGCATCTCAAGAAATTCTCTCCTAAAATCCAAGAAGAGCAGAGTGAATTAACTGATATTTTTTCAGCAATTGATGCCTTGCGAAGGTGTCCTGTTGGCTTAGATCCTGTATTAGAGGAAACCCTTCCTTCTGGTGTCGCCTATCACCATGCTGGCCTTACGGTGGAGGAAAGAGAAATTATTGAAACTTGTTATCGTAAAGGATTAGTACGTGTCCTAACTGCTACATCGACCTTAGCTGCTGGTGTCAATTTGCCTGCTAGAAGAGTCATATTCCGGCAACCCAAGATTGGTCGTGATTTTATCGATGGGACAAGATACAGACAGATGGCTGGTAGGGCTGGTCGTACTGGAATAGATGCAAAAGGAGAAAGTGTGCTTATTTGTAGACCTGAAGAACTTAAAAGAATAAAGGCCCTTCTTAATGACAGTTGCCCGCCACTGCAATCTTGTCTTTCTGAAGATAAAAATGGAATGACTCATGCAATTTTGGAAGTTGTTGCCAGTGGGATTGTTCAAACTGCTAATGACATCCATCGATATGTGAGGTGCACACTTCTTAATTCAACAAAACCTTTTGAGGATGTGGTAAAATCAGCACAGGATTCCCTTCGGTGGTTATGTCATAGAAAATTCCTTGAGTGGAGTGATGATACGAAGTTATACAGTACAACCCCTCTGGGTCGAGCAGCTTTCGGAAGTTCTCTCTCTCCAGAAGAGTCACTGATCGTACTGGATGATCTTTCACGAGCAAGGGAGGGATTTGTGCTAGCTTCTGATTTGCATTTGGTTTACTTGTCGACACCCATTAATGTTGAAGTTGAGCCTGACTGGGAATTGTTTTATGAAAGATTTATGGAGTTGTCCTCTCTGGATCAGTCAGTTGGCAACCGGGTTGGAGTTGTAGAGCCATTTCTGATGCGAATGGCACATGGTGCCCCCATACGAACTGCAAATCGAATAAAAAATAATATTAAAGGTTTGCATGGCCGGATAGATTCTCAACTTGGGGTCTCAAAAAGCAATATGCTTACTGATGAGCAGTCTCTTCGCGTGTGCAAACGATTCTATGTCGCCCTTATTTTATCTCGATTAGTGCAGGAAGTACCTGTTGGCGTGGTTTGTGAAGCTTTTAAAGTGGCACGGGGAATGGTGCAAGCTTTACAAGAAAATGCTGGGAGATTTGCATCTATGGTTTCTTTGTTTTGTGAAAGACTTGGTTGGCATGACCTGGAAGGGTTGATTGCCAAATTCCAAAACCGTGTTTCCTTTGGAGTTAGAGCAGAGATTGTGGAGCTTACTACAATTCCATATGTGAAGGGTTCTCGCGCAAGAGCACTATACAAAGCTGGCCTGCGTAGCCCTCTGGCAATAGCTGAAGCATCTGTGAACGAAATAGCCAAGTCTCTCTTCGAAGCCTCATCATGGGCTGCACAAGAAAATCTTGCACAGCGACGTATGCAGCTGGGAGTAGCAAAGAAGATTAAGAATGCTGCACGAAAAATTGTCCTTGAAAAAGCTGAGGAGGCACGAGTTGCTGCTTTTTCGGCCTTCCAGTCTCTTGGGTTGAGTGTCCCTCAACTTTCTCGTCCCGTCATATCACCTACACATACTTCAAGTCATTCATCTGGAAAAAGTGATACAAGAAGCTCTATGCATTTCAGAAATCAACCAAAGCATAAATCAATTGAACCAGCTAAAAGAGACGAGAATGAGGTAGCTTCAGTTACTGATGTTGGGACTTGCAATAGAATTTTACATGTTGGCTCAGGGACTTCTGTTGATGGAACGACACTCAACGCCTTGCCTAGTATTGCTGCTCAAGTTTCTTCTGTTCCAGTGGCAGATGCTGCTCCTCACAACTTGGCTAGTGTCTCTAATCCAGATGTTGATACTACACTGTCTCATAATTTTGGTCATCATGAAAGCTTGACATCTGTTGATGTTGAGATTAAGGAAGAGAAGACTTGGCAAAGAGACAAGGCCATCATTGGAAATAAGAAAACTTCAATTGAAAACGGTCCAATCAATATAGCCAGTGCTAGCTCATTGGATAGTTTCTTGGATCTTTGGGAATCCGTTGAAGAGTTCTATTTTGATATTCACTTCAACAAACGATCTGAAGTGAACTCTTTGATTGCATTTGAAGTTCATGGCATTTCCATTTGTTGGGAAAATTCACCTGTGTACTATGTCAGCCTTTGCAAGGCTTTGTTACTTTCTTCTGAGCAGTACACAAACTCCCCCAACAATGGTTCTTTTGAGCCGAGAAATTCTGTTGATCCAAACATATTGGTAGATGGGGTGAACCTTCGATGGAACAGGATTAGTGGGATACTGGGAAGTACTCATCTTCGAAAGTTTGCTTGGAACTTGAAAATTCAAGTTCAGGTGCTAAAAAATGCTCTTCTCGTACTTCAAAGAAATAGCCTGATTCAAGCTTTCAGAAATGCAGGCATTGTACTTGATGGTTCATTCTATAAGTTGCCCCAGGTTAGCTTGCAAAATGGAGTTGACATGTGCATTGTGGCATGGATTCTTTGGCCTGATGAGGAGAGAAGCTCTAATCCAAGTCTGGAGAAGGAAATTAAGAAGCGTTTATCTTCTGAAGCTGTGGCAGCTGCTAATCAGTGTGGAAGATGGAAAAATCAGATGAGAAGAGCTGCACACAATGGTTGCTGCCGCCGTGTTGCCCAAGTACGGGCCCTGCACTCTGTTCTTTGGAAATTGCTTGTTTCTGAAGAACTGGTTGAAGTGATTTTAAGTATTGAAATTCCATTGGTTGAAGTCCTTGCAGACATGGAGGTTTGGGGAATAGGTTTAGACATGGAAGGTTGCCTCAAGGCTCGTAAAGCAATAAGTAAAAAGCTCAGGATGCTTGAGAAGGAAGCTTACAAGCTGGCTGGCATGACATTTTCATTGAATATGCCAGCAGATGTTGCAAATGTGCTTTACCATCATTTGAAGCTCCCCGTGCCCGAGGGACACAATAAAGGAAAACAGCATGCAAGTACAGACAAATATTGTTTGGAATCATTAAGGCTCGAGCATCCGATTGTTCCTGTAATTAAGGAGCATCGTACATTAGGAAAGCTACTGAATTGCACATTAGGATCAATGTGCCATTTAGCAAGGTTGTCTGTGAAGACGCAAAAGCATACAATACATGGTCATTGGCTCCAGACATCAACAGCAACGGGGCGACTTTCAATGGAAGAACCTAATCTTCAGTGTGTTGAACATATGGTTGAATTCAAAATGCATCAAAATGGTGAAGTTAAGGGTGATTCTGATACTTTGCTTTGTAAAATCAATGCTCGAGACTTTTTCATACCTACAGAGGAGAACTGGCTACTCTTAACAGCTGACTATTCTCAGATAGAACTAAGGTTGATGGCCCACTTCTCAAAGGACCCGTCCCTAATTGAACTCCTCAGTAACCCACATGGCGATGCGTTTACCTTGATAGCATCTAGATGGACAGGCAAGCTGAACACTGATGTGAGCTCCCAAGAACGAGATCAAACGAAAAGGCTAGTCTATGGCATTCTCTATGGTATGGGTGCTAATACTCTTGCAGAGCAGTTGAATTGCAGCAAAGATGAAGCCAAAGCCAAAATTGAAAGTTTTAAAAGTGCTTTCCCTGGTGTTGCATCATGGCTTCATGAAGCTATTGCATTTTGTCGTCAACGAGGATATGTGCAGACACTGAAGGGTAGAAAACGCTTCTTGTCGAAAATAAAAATTGGCAACAATAAAGAGAAAGCTAAGGCTCAGAGACAAGCAGTGAATTCTATATGTCAGGGTTCTGCCGCTGATATAATTAAAATTGCAATGATCAACATCTATTCAGTTATTACTGGGATGAGTAATGATAGCTGCACTGCTGGGCTAGCGAAAAATTTTTCTATGCTCAAGGGCCGCTGCCGTATTCTCTTACAGGTACATGATGAATTGGTCCTGGAAGTTGATCCTCCTGTTTCAAAAGAAGCTGGGTTGCTGCTAAAAATGTGCATGGAGAATGCTGCCTCACTTCTAGTTCCTCTACTAGTAAAGGTGAAGGTCGGTACGACTTGGGGCTCATTGGAACCTTTCTTTACTGAAGAAGGGCATTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85793.p1 GENE.R_Transcript_85793~~R_Transcript_85793.p1 ORF type:complete len:2156 (+),score=454.65,DNA_pol_A|PF00476.16|5.8e-118,DEAD|PF00270.25|2.6e-14,Helicase_C|PF00271.27|6.5e-11 R_Transcript_85793:203-6670(+)
MDSGTPRSRIDQFYASKKKKASSPKTVKDSSLSSSPRGAKGSLENYLVTSSQNDCSSTKQGGSVKRNLALEIENGESLLPNQERFRVLDSSVAVPSEVAGAGNAGIGADHGGGLGPVLGPHSSKFKRSFAELGSMYCGEIPSSSLPEIKSNEHKREGSPSMLITEGKACKKRHCITNEKESRIDPGAPCCSTKNHELMPCDAIALKPEVDANASREVDCGNCIPGQQVSLRKCSSTTNSTSVVNECSTPAVLCRTSGARETPVSTRGSSMFSPGEAFWNEAIQVVDGLFSQTDTDFVQAIENPNIGKIQNQGSSQNLSVGSSKFKLNVPVVDVISCFRKTDKNISLHEKDVKNMDIEASPLPVKHFDFSFEEKNSNESTPRYRFSDRTEDIRGDFKLLENSSTRQKGPLTRNSKPVDVEVQLHRVVHKVPETTSIPRAAERRPNLTLDSDSTVSDSPNRENMNFVASGASDDGSSPSSFIPLESRLDLSNWLPPAVCNIYRQKGITNLYPWQIDCLQVEGVLQKRNLVYCASTSAGKSFVAEILMLRRVIETGKMALLVLPYVSICVEKAEHLERLLEPLCKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEDRLSEVGIIVIDELHMVADPSRGYLLELLLTKLRYAIGEGTGESSSAESSGFSSGKGDVAHGMQIVGMSATMPNVAAVADWLRAALYQTEFRPVPLEEYIKVGNNIYDKNMEIVRTIPKSADLAGKDPDHVVQLCNEVVQDGHSVLIFCSSRKGCESTARHISMHLKKFSPKIQEEQSELTDIFSAIDALRRCPVGLDPVLEETLPSGVAYHHAGLTVEEREIIETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGIDAKGESVLICRPEELKRIKALLNDSCPPLQSCLSEDKNGMTHAILEVVASGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLRWLCHRKFLEWSDDTKLYSTTPLGRAAFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLSTPINVEVEPDWELFYERFMELSSLDQSVGNRVGVVEPFLMRMAHGAPIRTANRIKNNIKGLHGRIDSQLGVSKSNMLTDEQSLRVCKRFYVALILSRLVQEVPVGVVCEAFKVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLIAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRSPLAIAEASVNEIAKSLFEASSWAAQENLAQRRMQLGVAKKIKNAARKIVLEKAEEARVAAFSAFQSLGLSVPQLSRPVISPTHTSSHSSGKSDTRSSMHFRNQPKHKSIEPAKRDENEVASVTDVGTCNRILHVGSGTSVDGTTLNALPSIAAQVSSVPVADAAPHNLASVSNPDVDTTLSHNFGHHESLTSVDVEIKEEKTWQRDKAIIGNKKTSIENGPINIASASSLDSFLDLWESVEEFYFDIHFNKRSEVNSLIAFEVHGISICWENSPVYYVSLCKALLLSSEQYTNSPNNGSFEPRNSVDPNILVDGVNLRWNRISGILGSTHLRKFAWNLKIQVQVLKNALLVLQRNSLIQAFRNAGIVLDGSFYKLPQVSLQNGVDMCIVAWILWPDEERSSNPSLEKEIKKRLSSEAVAAANQCGRWKNQMRRAAHNGCCRRVAQVRALHSVLWKLLVSEELVEVILSIEIPLVEVLADMEVWGIGLDMEGCLKARKAISKKLRMLEKEAYKLAGMTFSLNMPADVANVLYHHLKLPVPEGHNKGKQHASTDKYCLESLRLEHPIVPVIKEHRTLGKLLNCTLGSMCHLARLSVKTQKHTIHGHWLQTSTATGRLSMEEPNLQCVEHMVEFKMHQNGEVKGDSDTLLCKINARDFFIPTEENWLLLTADYSQIELRLMAHFSKDPSLIELLSNPHGDAFTLIASRWTGKLNTDVSSQERDQTKRLVYGILYGMGANTLAEQLNCSKDEAKAKIESFKSAFPGVASWLHEAIAFCRQRGYVQTLKGRKRFLSKIKIGNNKEKAKAQRQAVNSICQGSAADIIKIAMINIYSVITGMSNDSCTAGLAKNFSMLKGRCRILLQVHDELVLEVDPPVSKEAGLLLKMCMENAASLLVPLLVKVKVGTTWGSLEPFFTEEGHC*

Click here to download the sequence:
Link to NCBI Protein BLAST