Transcript Information: R_Transcript_85895.p1


Annotated TAIR IDAT5G59400.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23957756-23959518 | Forward length=301
E-Value4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58503079983073
Replicate 20
Replicate 30.29367612302759
Condition 2: 8 Hour
Replicate 10.78480336369376
Replicate 21.7200678339374
Replicate 30.8144953483507
Condition 3: 24 Hour
Replicate 10
Replicate 21.4137986468319
Replicate 30.42091739782495


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85895.p1 GENE.R_Transcript_85895~~R_Transcript_85895.p1 ORF type:complete len:156 (+),score=4.20 R_Transcript_85895:107-574(+)
ATGGCTGGAGCTGGTACCTCTCTCTCTCCACCACCTCGCTTTATCGGACCCTCCAAATCCACCGCCATCAAGTTTATCCGACCCAACTTCACAACCGGAGCTCCGTTCACTTTCCGAATAACCCCCCACAGCCACCGCTCGCACTTGCTTTCCACGTGCTTCAGCTCCAAAACCCCGTCTCCGGTCGTCTCCGAGGGCCCGTCTTGTATTTTTGTGGGCCCCATCGAAACCGCTAGCCAAGAAACCCTTGAGGCTCTCTATCGCCAAGCGAGAGATGCGTATTACAGTGGGACTCCTTTGATAGTTGATGATATGTTTGATCGTGTCGAGTTGAAATTGAGGTGGTATGGGTCGAAATACGTGGTCAAGTATCCAAGGTGTAGTTTAAGGCGGCAATCCACCTATGCTGATGCCCAGGGCAGGAAGATCCTTCGCAGGTGTTTGCTCTGGCCAGTATTTGGTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85895.p1 GENE.R_Transcript_85895~~R_Transcript_85895.p1 ORF type:complete len:156 (+),score=4.20 R_Transcript_85895:107-574(+)
MAGAGTSLSPPPRFIGPSKSTAIKFIRPNFTTGAPFTFRITPHSHRSHLLSTCFSSKTPSPVVSEGPSCIFVGPIETASQETLEALYRQARDAYYSGTPLIVDDMFDRVELKLRWYGSKYVVKYPRCSLRRQSTYADAQGRKILRRCLLWPVFGS*

Click here to download the sequence:
Link to NCBI Protein BLAST