Transcript Information: R_Transcript_85941.p1


Annotated TAIR IDAT1G04530.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR4
Annotation TypeHomolog
Chromosome Positionchr1:1234456-1235895 | Reverse length=310
E-Value8E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.569954430411
Replicate 28.1414226104013
Replicate 38.0056710476349
Condition 2: 8 Hour
Replicate 16.6836417075389
Replicate 26.4458664491173
Replicate 38.4738386314562
Condition 3: 24 Hour
Replicate 18.0235193627435
Replicate 27.4267708509087
Replicate 36.4211378545745


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85941.p1 GENE.R_Transcript_85941~~R_Transcript_85941.p1 ORF type:complete len:392 (+),score=114.56,TPR_19|PF14559.2|0.31,TPR_19|PF14559.2|0.24,TPR_19|PF14559.2|43,TPR_19|PF14559.2|0.023,TPR_19|PF14559.2|0.58,TPR_19|PF14559.2|11,TPR_11|PF13414.2|0.016,TPR_11|PF13414.2|81,TPR_11|PF13414.2|2.2e-05,TPR_12|PF13424.2|0.0045,TPR_12|PF13424.2|88,TPR_12|PF13424.2|2.2,TPR_12|PF13424.2|0.00056,TPR_17|PF13431.2|0.00036,TPR_17|PF13431.2|1.3e+02,TPR_17|PF13431.2|2.6e+02,TPR_17|PF13431.2|39,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|1.4e+03,TPR_14|PF13428.2|34,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|22,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|4.3,TPR_14|PF13428.2|2.9,TPR_14|PF13428.2|1.4e+03,TPR_16|PF13432.2|0.00037,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|19,TPR_16|PF13432.2|9.8 R_Transcript_85941:143-1318(+)
ATGTTAGAGACTGCTCCATCATTCTCAATATACACCAAGAATACAGGGAAAGGGGAAGAGGAGGTGAAAGAAAATGGGTTGGAAGATGAAGATACCAAATTGGTTAGATCAGTGACACTTTTGGAAAAGATTGAAGGGAAAGCTGTGGGCAGTGGTGATTTCAGCTTTATTGAACCAAACATGGATTTGATCAAAGAAGAAGGGGATGAAGTAGAAGAAGAGGTTGTTGATAAATTAGAAAAATTGGGTACTCAAGAGTTGGACTCCCCACCTAGTCCTCCTATGTACTTAGCTGCTGGGCTTAGGATAAAAGATGGTGCTGAGAGTTTTCAATTAGATAAAGAATACTCTGAGGAGTATTATAGAGAACTGTTAGAGGAATATCCTAACCACCCTCTGATTTTAAGCAATTATGCAAAGTTCCTCCAGAGCAAAGGGGACCTACAAGGAGCAGAATACTACTATTTTCGTGCTACTCAAGCTGATCCTGGAGATGGAGAGATTATGTCACAGTATGCCAAATTGATGTGGGAGCTTCATCGTGACAGAGAAAAAGCTTTGACATACTTTGAGCATGATATTCAAACTGCTCCAGCAGATAGTGATGTTCTTGCCGCATATGCCAAATTCCTTTGGGAAATAGATGATGACAGCGCAGAAAAACCTAGCCTTCCCAACAGCGTTCAGCTGGAAGAGACCCAAAAAGTTGTTTATTCAGTTGACGTAGGCAGTGAGAATTTTGATGCTGGTAATGCTGGTCTTGAAAATGGAGCAGGTGGCACAAATGAGAACGACAATATTGAAGAGTACTACAAAAGGATGATTGAGGAAAATTCATCAGATCCTCTTTTTCTGAAAAATTGTGCTGAGTTCCTTTTTCAGTCAAAGGGAGATCTTAAAGGGGCGGAAGAGTACTACTCACATGCCAACTTGGCTGACCCACAAGATGGTGAGATCTTGTCGCAGTATGCCAAACTAGTTTGGGAACTTCATCATCACCAAGACAAAGCGTTGGCATACTTTGAACAAGCAATTGACGCTGCGCTAGGGAATAGCAATGTTCTTGCAGCATATGCTAGTTTCTTATGGGCGGTAGATGATGATGAAGTTGACGAGCAGCTAGGTTTACTTACTGAGAGAGCACTTGCAGGTTGCACTGGTGTTGCAACAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85941.p1 GENE.R_Transcript_85941~~R_Transcript_85941.p1 ORF type:complete len:392 (+),score=114.56,TPR_19|PF14559.2|0.31,TPR_19|PF14559.2|0.24,TPR_19|PF14559.2|43,TPR_19|PF14559.2|0.023,TPR_19|PF14559.2|0.58,TPR_19|PF14559.2|11,TPR_11|PF13414.2|0.016,TPR_11|PF13414.2|81,TPR_11|PF13414.2|2.2e-05,TPR_12|PF13424.2|0.0045,TPR_12|PF13424.2|88,TPR_12|PF13424.2|2.2,TPR_12|PF13424.2|0.00056,TPR_17|PF13431.2|0.00036,TPR_17|PF13431.2|1.3e+02,TPR_17|PF13431.2|2.6e+02,TPR_17|PF13431.2|39,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|1.4e+03,TPR_14|PF13428.2|34,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|22,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|4.3,TPR_14|PF13428.2|2.9,TPR_14|PF13428.2|1.4e+03,TPR_16|PF13432.2|0.00037,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|19,TPR_16|PF13432.2|9.8 R_Transcript_85941:143-1318(+)
MLETAPSFSIYTKNTGKGEEEVKENGLEDEDTKLVRSVTLLEKIEGKAVGSGDFSFIEPNMDLIKEEGDEVEEEVVDKLEKLGTQELDSPPSPPMYLAAGLRIKDGAESFQLDKEYSEEYYRELLEEYPNHPLILSNYAKFLQSKGDLQGAEYYYFRATQADPGDGEIMSQYAKLMWELHRDREKALTYFEHDIQTAPADSDVLAAYAKFLWEIDDDSAEKPSLPNSVQLEETQKVVYSVDVGSENFDAGNAGLENGAGGTNENDNIEEYYKRMIEENSSDPLFLKNCAEFLFQSKGDLKGAEEYYSHANLADPQDGEILSQYAKLVWELHHHQDKALAYFEQAIDAALGNSNVLAAYASFLWAVDDDEVDEQLGLLTERALAGCTGVATR*

Click here to download the sequence:
Link to NCBI Protein BLAST