Transcript Information: R_Transcript_85979.p2


Annotated TAIR IDAT1G53200.1
Annotated Gene Nameunknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19840486-19843169 | Reverse length=613
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0324407975891
Replicate 23.1527991040448
Replicate 33.1469320020273
Condition 2: 8 Hour
Replicate 11.8775104112904
Replicate 22.9290611996441
Replicate 34.4654121973476
Condition 3: 24 Hour
Replicate 11.4669525385114
Replicate 21.9025303196345
Replicate 32.4475069138703


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85979.p2 GENE.R_Transcript_85979~~R_Transcript_85979.p2 ORF type:complete len:313 (+),score=51.99,TAF1_subA|PF14929.2|2.9e-70 R_Transcript_85979:1171-2109(+)
ATGATGACGCGTCTCAAGATCATCGCAGAAAAATTAATAGTTCTCGTGTCTTTAATGTCCATGGTGAGTTTCAAGCGATATCTTCAATCATTGTTACCATTAAGATTACCCTCTTTGGACCCTTCCTTGTCTTATGGAGGACACTTTAATGATGATTACCACAATGCCTTAAAGTGCTTACAGCTTGCTGTACACTCTTCGCCTCCAGTATGTGAAGCAGCATTGCTTCCTTTGATACAGCTCTTGCTGCTTGGTGATCAAGTTGATGAGGCCATTGTTGTTCTTCAGAAATGCTGCAATAAATCAAGCTCAGTGCTTCCTTTTAGATTAATGGCTCGTGTTTGGGATTGCTTTTATGCCAACGATTATGACAAGCTATCAGCCTCTTTTGAGGATGTATTGAAGAAAGACCCAACATGTAGACATTCACTGGATAGACTTCTTCTCTTGCATATGAAAGGGGACTATTCTCCTGATCGGCTTGTTGAGATGATTGCTTTGCACTTGGAAGCTACCTATGCAGATGATGATATTTGGAGGGAATTTGCTTCTTGTTTACTTAAACTTTCTTGTTCTGAAGAAGACAGAGAATCCATATGCGCAGAGCAAATTGAGGATGAGCAAAGACGCACCATTCCTCTCCATAGGATTCCTATCGTATTTGTGGCAGGGATGTCAAGGACGACTTGGAAGCTGCGATGTGAATGGTGGTTGAATCGTCATTTCAGCAAGGACATGCTTACATCTGAAATGACTGCAGGGGAGATGCAGCTCATGACCTACAAGGCAGCTTGTGCATCGTATCTTTATGGAAATGAATTGGAATATGTTGTGAGAGTCCTTGAATATGTGAAGGAACAGAATAGGACAACGTTCACAATTTTGCGTATGCACATAAAGCGGTGTCTTGGTCTTTACTCTTATTTGATTAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85979.p2 GENE.R_Transcript_85979~~R_Transcript_85979.p2 ORF type:complete len:313 (+),score=51.99,TAF1_subA|PF14929.2|2.9e-70 R_Transcript_85979:1171-2109(+)
MMTRLKIIAEKLIVLVSLMSMVSFKRYLQSLLPLRLPSLDPSLSYGGHFNDDYHNALKCLQLAVHSSPPVCEAALLPLIQLLLLGDQVDEAIVVLQKCCNKSSSVLPFRLMARVWDCFYANDYDKLSASFEDVLKKDPTCRHSLDRLLLLHMKGDYSPDRLVEMIALHLEATYADDDIWREFASCLLKLSCSEEDRESICAEQIEDEQRRTIPLHRIPIVFVAGMSRTTWKLRCEWWLNRHFSKDMLTSEMTAGEMQLMTYKAACASYLYGNELEYVVRVLEYVKEQNRTTFTILRMHIKRCLGLYSYLIRK*

Click here to download the sequence:
Link to NCBI Protein BLAST