Transcript Information: R_Transcript_85984.p1


Annotated TAIR IDAT1G65700.3
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24434463-24435870 | Reverse length=141
E-Value4.4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.607283973495
Replicate 245.447688242873
Replicate 351.467669915406
Condition 2: 8 Hour
Replicate 144.322515031089
Replicate 249.392074446669
Replicate 351.238090738561
Condition 3: 24 Hour
Replicate 155.650887140574
Replicate 261.140527810588
Replicate 361.507220765712


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85984.p1 GENE.R_Transcript_85984~~R_Transcript_85984.p1 ORF type:5prime_partial len:158 (+),score=29.78,LSM|PF01423.18|1.3e-16 R_Transcript_85984:2-475(+)
AAAAAAAGAGAACCCCAAAGCACTCTCTCTCGGCCCTTCCTCTCATTCCGGATACCGTGGCAGTGCCACAGACGGCAGCTTGAGCTTCCCCCCCTCTCTTCATCCTTAATCAACATTTTAGCACAACCAGTGATTGCAAAAACTGTTGAGTTGATTATTCATCTTGGAGGTTGCAGAATGTCTACTGGACCTGGACTTGAGCCTCTAGTGGATCAAATGATTTCAGTTATTACCAATGATGGACGCAACATAATGGGAATCCTGAAAGGTTTTGATCAAGCAACAAATATAATTCTTGATGAATCACATGAGAGGGTTTTTTCCACCAAGGAAGGTGTCCAGCAAATTGTATTGGGTTTGTACATCATCAGGGGTGATAACATAAGCATTATTGGCGAGCTAGATGAAGAGTTGGATGCACAGATTGAGTTATCAGAGCTAAGGGGCCATCCTTTGAAGCCTGTTATCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85984.p1 GENE.R_Transcript_85984~~R_Transcript_85984.p1 ORF type:5prime_partial len:158 (+),score=29.78,LSM|PF01423.18|1.3e-16 R_Transcript_85984:2-475(+)
KKREPQSTLSRPFLSFRIPWQCHRRQLELPPLSSSLINILAQPVIAKTVELIIHLGGCRMSTGPGLEPLVDQMISVITNDGRNIMGILKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISIIGELDEELDAQIELSELRGHPLKPVIH*

Click here to download the sequence:
Link to NCBI Protein BLAST