Transcript Information: R_Transcript_85988.p1


Annotated TAIR IDAT1G51355.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19041475-19041825 | Forward length=116
E-Value1.7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.072824568475
Replicate 210.250162407957
Replicate 36.6736164650208
Condition 2: 8 Hour
Replicate 13.2776354653793
Replicate 29.6838464666552
Replicate 38.0038598011155
Condition 3: 24 Hour
Replicate 14.5192533912803
Replicate 27.641192056578
Replicate 38.1001741754659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85988.p1 GENE.R_Transcript_85988~~R_Transcript_85988.p1 ORF type:5prime_partial len:127 (+),score=30.86 R_Transcript_85988:3-383(+)
GCAACAAGGAGAATTATAACAAGGAGTATATACAAGAAGCAACAACAACAGTTGTTGATGACGAAGAAGGAGGATCAGAAACCGTTGTCGAAAACCGTTGTCAATGATGAAGCTTCAAGTACCACAACAACAACAACAACAACAACAACAACAACAACAACAAATAGTAAGAGTTTTGAAGAAGGTTGTTCAACACCAAAGTCAGAGAAATACAAGATACCAGAAATCAAAACATGCCCACCAGCTCCAAAGAAGCCTAAAGTTTCTCCTAATACAAATAATTGCTTAGTTCAAAGAAGGAGACAAATTGCTTTCTTTGCTCATCCTGATATTGACAAGTTCTTCATGTTTGCTGCCATGAGAGATCATATCAAGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85988.p1 GENE.R_Transcript_85988~~R_Transcript_85988.p1 ORF type:5prime_partial len:127 (+),score=30.86 R_Transcript_85988:3-383(+)
ATRRIITRSIYKKQQQQLLMTKKEDQKPLSKTVVNDEASSTTTTTTTTTTTTTTNSKSFEEGCSTPKSEKYKIPEIKTCPPAPKKPKVSPNTNNCLVQRRRQIAFFAHPDIDKFFMFAAMRDHIKV*

Click here to download the sequence:
Link to NCBI Protein BLAST