Transcript Information: R_Transcript_85989.p1


Annotated TAIR IDAT1G51355.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19041475-19041825 | Forward length=116
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9969683659755
Replicate 24.3742292533954
Replicate 39.3535845184289
Condition 2: 8 Hour
Replicate 15.3052707385698
Replicate 25.9629018243162
Replicate 36.8068539826451
Condition 3: 24 Hour
Replicate 16.3133969876186
Replicate 24.0434641299392
Replicate 36.7487089451267


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85989.p1 GENE.R_Transcript_85989~~R_Transcript_85989.p1 ORF type:5prime_partial len:120 (+),score=28.98 R_Transcript_85989:3-362(+)
GCAACAAGGAGAATTATAACAAGGAGTATATACAAGAAGCAACAACAACAGTTGTTGATGACGAAGAAGGAGGATCAGAAACCGTTGTCGAAAACCGTTGTCAATGATGAAGCTTCAAGTACCACAATAACAACAACAACAAATAGTAAGGGTTTTGAAGAAGGTTGCTCAACACCAAAGTCAGAGAAATACAAGATACCAGAAATCAAAACATGCCCACCAGCTCCAAAGAAGCCTAAAGTTTCTCCTAATACAAATAATTGCTTAGTTCAAAGAAGGAGACAAATTGCTTTCTTTGCTCATCCTGATATTGACAAGTTCTTCATGTTTGCTGCCATGAGAGATCATATCAAGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85989.p1 GENE.R_Transcript_85989~~R_Transcript_85989.p1 ORF type:5prime_partial len:120 (+),score=28.98 R_Transcript_85989:3-362(+)
ATRRIITRSIYKKQQQQLLMTKKEDQKPLSKTVVNDEASSTTITTTTNSKGFEEGCSTPKSEKYKIPEIKTCPPAPKKPKVSPNTNNCLVQRRRQIAFFAHPDIDKFFMFAAMRDHIKV*

Click here to download the sequence:
Link to NCBI Protein BLAST