Transcript Information: R_Transcript_86075.p1


Annotated TAIR IDAT5G06490.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1977996-1978589 | Reverse length=197
E-Value7.1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4087427601643
Replicate 26.9266145703251
Replicate 311.453368798076
Condition 2: 8 Hour
Replicate 16.4370057335541
Replicate 25.0715402114029
Replicate 34.2104251439042
Condition 3: 24 Hour
Replicate 16.2719782632387
Replicate 25.2295974688998
Replicate 34.5129288014221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86075.p1 GENE.R_Transcript_86075~~R_Transcript_86075.p1 ORF type:complete len:194 (+),score=32.56,zf-RING_2|PF13639.2|1.2e-13,zf-RING_11|PF17123.1|2.7e-10,zf-RING_11|PF17123.1|6.3e+03,zf-rbx1|PF12678.3|1.5e-09,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4_2|PF13923.2|6.6e-08,zf-C3HC4|PF00097.21|4.9e-07,zf-RING_5|PF14634.2|6.2e+03,zf-RING_5|PF14634.2|3.7e-06 R_Transcript_86075:192-773(+)
ATGATGGGTAATATGAATCTGATAACAACTATAATAGGATTTGGGATGAGTTCTATGTTTATTATGTTTATCTGCACAAGGCTAATCTGTGGGAGGCTATGGCGATCAGAGTCAAGGCCAATGATTTATACTGGACCACCAATTGATCTTGAGCAGCCAGAGCAAAGGATGACTAATGGACTTGAATCAACTGTGGTTGCTGCAATCCCCACTATGAAGTTTCATCGCGATGCTTTCAGCTCCCTTGAAGATGCACAGTGTTCAATTTGCTTGGGGGAGTACCAAGAAAACGAAATACTGAGAATTATGCCCAAGTGTGGTCACAATTTTCATCTTTCCTGCATTGATATCTGGTTGACAAGGCAATCGACATGCCCTGTATGCCGTCTTCCCTTGAAGCATCGTCCTGACAAAAAGAGTGCAATGTTTGTTTCCTTTGATGACAATGATGATGTTCAACATTCCATGGACCAGTCGTTGGTTCCTATTTCAGCAGGAAATGACACTAGCCAACAGCACAACCGTTCTACATCTACAGACCCAGGTTCCAATTTGGCTGGAGAATCAGTGCCTAGACACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86075.p1 GENE.R_Transcript_86075~~R_Transcript_86075.p1 ORF type:complete len:194 (+),score=32.56,zf-RING_2|PF13639.2|1.2e-13,zf-RING_11|PF17123.1|2.7e-10,zf-RING_11|PF17123.1|6.3e+03,zf-rbx1|PF12678.3|1.5e-09,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4_2|PF13923.2|6.6e-08,zf-C3HC4|PF00097.21|4.9e-07,zf-RING_5|PF14634.2|6.2e+03,zf-RING_5|PF14634.2|3.7e-06 R_Transcript_86075:192-773(+)
MMGNMNLITTIIGFGMSSMFIMFICTRLICGRLWRSESRPMIYTGPPIDLEQPEQRMTNGLESTVVAAIPTMKFHRDAFSSLEDAQCSICLGEYQENEILRIMPKCGHNFHLSCIDIWLTRQSTCPVCRLPLKHRPDKKSAMFVSFDDNDDVQHSMDQSLVPISAGNDTSQQHNRSTSTDPGSNLAGESVPRH*

Click here to download the sequence:
Link to NCBI Protein BLAST