Transcript Information: R_Transcript_86175.p1


Annotated TAIR IDAT1G80130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30141250-30142478 | Reverse length=305
E-Value6.8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0349584848166
Replicate 20.99306826293302
Replicate 31.0834267781964
Condition 2: 8 Hour
Replicate 14.7979059693926
Replicate 20.60434815786988
Replicate 31.9623362832851
Condition 3: 24 Hour
Replicate 10.8531617550836
Replicate 20.29804403906186
Replicate 30.22183484479964


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86175.p1 GENE.R_Transcript_86175~~R_Transcript_86175.p1 ORF type:complete len:296 (+),score=68.67,TPR_17|PF13431.2|1.4e+04,TPR_17|PF13431.2|0.00021,TPR_17|PF13431.2|0.24,TPR_17|PF13431.2|4.5,TPR_19|PF14559.2|6.8e-05,TPR_19|PF14559.2|0.47,TPR_14|PF13428.2|0.62,TPR_14|PF13428.2|0.62,TPR_14|PF13428.2|0.44,TPR_12|PF13424.2|0.095,TPR_12|PF13424.2|2.2e-06,TPR_16|PF13432.2|0.23,TPR_16|PF13432.2|8.5e-06,TPR_11|PF13414.2|0.019,TPR_11|PF13414.2|0.014,TPR_1|PF00515.24|16,TPR_1|PF00515.24|2.8,TPR_1|PF00515.24|2.1 R_Transcript_86175:156-1043(+)
ATGTTGTTAAGGAGTTCATCAACCCCAATCTTAAACTCATGGATGCCTCATCATCATCATACACCTTATCCTAGAGAATCATCTCCAGATAATATTAACAACCACAATAACAACAATAATAATAATAGCAATGACCTTTCTCTACATCATGTCCTTCCTAGGAGTAAATCCAATATTACCACCACCCTTACAACTTCTTCCTCTACTTCTCCTTGTCAATCTCCCACCCACCAATCAAAACTTGCCACGCGTACGCTTTCCGACACCAACCTCCCTCCCCACACCGCCACCACCACGCGCCTCCAACGCCTCTTCTCAAGCTCCGGCCTAGACGAACCTGCCGAGGAGGAGGTGAGAAAGAAGATGGAGTTGGCTGCGTTGGTTGAAGGCGGCGGCTGTGGCGGTGGTGGCAGAAGTGGTGGTTGTTGCGGTGGTGGTGGTGGTGGCTCAGAGTTTCATGAGTATGGTAATAGTAGTAATGAGCATGAGAGTGTTGAAGCTTATTATCAGAAAATGATCAAGGCTAATCCTGGAAATGCACTCTTGCTTGGTAATTATGCTAGGTTCTTGAAAGAGGAACGTGGAGATTTAGCTAAGGCAGAGGAATATTGTGGAAGATCAATTTTAAACAACCCAGGAGATGCAAATTTGCTATCCCTCTATGCTGATATCATTTGGCAAACCCAAAAGGATGTTCAGCGTGCTGAGAGCTACTTTGATCAGGCTGTTAAAACTGCTCCCGATGACTCGTATGTTTTTGCATCATACGCAAAATTTCTATGGGATGTGGAAGATGAGGAGGAACAAGAGGGAGGACAACATGACAAATTGGAAAGACCAAGTACATCACCTCCAAAATATTGGGAAGGAACACCTAATCAACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86175.p1 GENE.R_Transcript_86175~~R_Transcript_86175.p1 ORF type:complete len:296 (+),score=68.67,TPR_17|PF13431.2|1.4e+04,TPR_17|PF13431.2|0.00021,TPR_17|PF13431.2|0.24,TPR_17|PF13431.2|4.5,TPR_19|PF14559.2|6.8e-05,TPR_19|PF14559.2|0.47,TPR_14|PF13428.2|0.62,TPR_14|PF13428.2|0.62,TPR_14|PF13428.2|0.44,TPR_12|PF13424.2|0.095,TPR_12|PF13424.2|2.2e-06,TPR_16|PF13432.2|0.23,TPR_16|PF13432.2|8.5e-06,TPR_11|PF13414.2|0.019,TPR_11|PF13414.2|0.014,TPR_1|PF00515.24|16,TPR_1|PF00515.24|2.8,TPR_1|PF00515.24|2.1 R_Transcript_86175:156-1043(+)
MLLRSSSTPILNSWMPHHHHTPYPRESSPDNINNHNNNNNNNSNDLSLHHVLPRSKSNITTTLTTSSSTSPCQSPTHQSKLATRTLSDTNLPPHTATTTRLQRLFSSSGLDEPAEEEVRKKMELAALVEGGGCGGGGRSGGCCGGGGGGSEFHEYGNSSNEHESVEAYYQKMIKANPGNALLLGNYARFLKEERGDLAKAEEYCGRSILNNPGDANLLSLYADIIWQTQKDVQRAESYFDQAVKTAPDDSYVFASYAKFLWDVEDEEEQEGGQHDKLERPSTSPPKYWEGTPNQL*

Click here to download the sequence:
Link to NCBI Protein BLAST