Transcript Information: R_Transcript_86180.p1


Annotated TAIR IDAT5G24360.2
Annotated Gene Nameinositol requiring 1-1
Annotated Gene Symbol(s)IRE1-1
Annotation TypeOrtholog
Chromosome Positionchr5:8316718-8319827 | Forward length=887
E-Value2.2E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.892162190178
Replicate 29.7226528939859
Replicate 311.945851028644
Condition 2: 8 Hour
Replicate 18.5849008304564
Replicate 210.650386940895
Replicate 315.029613644885
Condition 3: 24 Hour
Replicate 113.238074068456
Replicate 210.504820111058
Replicate 312.572760906145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86180.p1 GENE.R_Transcript_86180~~R_Transcript_86180.p1 ORF type:complete len:907 (+),score=169.22,Ribonuc_2-5A|PF06479.8|9.2e+03,Ribonuc_2-5A|PF06479.8|9.9e-44,Pkinase|PF00069.21|8.2e-37,Pkinase_Tyr|PF07714.13|3.7e-27 R_Transcript_86180:367-3087(+)
ATGCAGTTGCAAATGAAGTTTATAGTGATCAATGCATTGTGGCTAATTGCTTTTTTAGTCTTTTGTCTTGTCAAATTATCCGTTTCTGAAGCTCCACCTCCACCTTCTTCTACCTCTTTGGCTAAACGTTCTTATGATCTTTCTTCCTCTATTGTCCCTGCCAATCGACATGAAGCTGTGCTTGTGGCTACGTTGGATGGCACTATATCTTTAGTGGAGATTGAGTCCAGGAAGATCCTTTGGTCAGTCAAGACAGGCCTTCCAATTTATTCATCTTATCAAGCCTCTTGGAATCTTGATGTCAATTTGAAAAATGCTAATGAGCATCGGGATGCAACCTATATAGATTGCGGAGATGACTGGAATTTATATAAACATGACAGAGCTAAGGGCATTATGGAGAGGCTGAAGAGTGCCAAAGATTTAATTAAAGAAACAAAAGGACTTTCGAAGAATGGGACGGCAGTAATAGGTCAAATGGCCACCACAGTATTCATTGTCAATGCGGAAACTGGAGCTGTGATTCGTACAGTGAGATTTTCGGAGTCCTCTGGCTTGGGTTTTGATGATGGCGAAAATCCTATTGTAGTTAGAGAAGAGAGTAAAGAGCAGATTTCCATCACAAGGACAGATTATTCATTTCTGGCATACTCTAAAACATCTGGCAATGTTCTATGGAATGTGTCACTTGCAGAATTTGAGGCCGAATCTTTCTGTTCAGATGTGGAGAGTTCGATTGTAGGTGATTTACAAGATCAGATTGGCTCTGTTTACAAGAGCCATTCTAAGATGCCTAAATCTTGTATGAGACGCACAATTGTCTACCGCATCCGTGATCCTGGATTCTCAGAGTTGATCTCTGGGGCTGGAATGATTACTGACATGCCAAGATTACTGCCAGGAGGAAGGGTGCTTCCCTTACCTGGTCCACATCATTTGCAGCTACCCATGCCTGCAGGTGAATTACCTGGTGCTCATCATGATTCAAATACGGTGTTGGGGTCGCCCTCCATGGAGAGCAGTTATGTTCATTCATCAGAGGTGCTGGCTTTGCCTTCTCCTGAAGTCCAAACTGCTCAAAATGCTAAAGCAACTATATTTCCTGAGTCCAGTATAGCTCATTTTCTGTGGTGGCCAGTCATATCTGGTCTCCTCCTCCTGTTTACGGTGAGCTATTATGCTATATACCGGGGTGTTTTTGTCCGAGAAAATAAGCAGAGTGACGATTTCAAATCAAAATCGACAACACCAAAGAAAAAGAAACCTAGGAGAGCAGGGAACAGCAAGAATAACTCTACCTATAACAATATTAGTGGAAGCCCTTCAAATGGAGACAGCAGTTTGGCTGAACTTTCAAATCTTAGTAAGAGTACACAGTCAACTTTTACTAGTTTGATTAATGCCCAGGTAAATGGGCGTAATATTGGTAAGCTATGGGTAACTGGTACTGAGATTGCAAAGGGAAGCAATGGGACAGTTGTCCTTGAAGGTATTTATGATGGTCGCCCTGTAGCTGTTAAACGCCTCGTGCGGACTCATCATGATGTGGCACTTAAAGAAATTCAGAATCTCATGGCTTCCGATCAGCATACTAATATAGTGAGATTTCATGGGGTAGAGTTCGATTCTGACTTTGTTTATCTGTCTCTGGAGCGGTGCCTTTGTAGCTTGAGTGATTTGATCTATCTTTATTCTGAATCTTCGCAAAATGCAACAAGCCCAAAGGTTGTGGATTCCAACTCTATTAATGGTTGTACTGTGCAATTGCCTGAAGGTTTAGTGAGTGACAAAGATGTTGAATTGTGGAAGGCTAATGGATACCCTTCACCTCAATTATTAAAACTGATGAGGGATGTTGTATCAGGGATTGCACATCTTCATGAACTTGGGTTCATACATCGGGATCTGAAACCTCAGAATGTTCTGGTGGTGAAGGAGAGGGTTTTATGTGCAAAACTTTCAGATATGGGCATCAGCAAGCGCCTTGTAGGAGATGTGTCTTCCTTGACCCAGCATGCTACTGGTACTGGGAGTTCAGGTTGGCGATCTCCGGAGCAAATTCTTCATGGTCGCCAGACACGTGCTGTGGATCTATTCAGTTTAGGCTGTGTACTTTTCTTTTGTATGACTGGAGGTAAACATCCCTTTGGTGACATTTTTGAGCGGGATGCAAATATTGTGAAGAACCAAAAGGACCTATTCTTAGTGGAACATGTTCCAGAAGCAGTTGACCTTATTACAAATCTCTTAGATCCTAATCCAGAGATGAGGCCAAAAGCTATGGAGGTGTTGCATCATCCATTATTTTGGAATTCTGAAAAGCGGCTCTCATTTCTTCGGGATGCCAGTGATCGTGTTGAACTGGAAGACAGGGAAACAGACTCCGAATTGCTGGAAGCTCTAGAAGCCACTGCACCAGTGGCTTTGGGTGGAAAATGGGATGATAAACTTGAGAGTTCATTTCTCACTAACATAAACCGTTACAGGCGATACAAGTATGACAGTGTTCGTGACTTGCTTCGGGTGATACGCAACAAGTTAAATCACTATAGGGAGCTCCCGATTGAAATTCAGGAAGTATTGGGGTCAGTTCCTGAAGGATTCGACGCCTATTTCACAGTTCGATTTCCTAAGCTTCTAATTGAGGTTTACAGAGTAATACGTGTTTACTGCCAGGAGGAGGAGCTGCTCGGCAAGTACTTCAAAAGCAGCTTGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86180.p1 GENE.R_Transcript_86180~~R_Transcript_86180.p1 ORF type:complete len:907 (+),score=169.22,Ribonuc_2-5A|PF06479.8|9.2e+03,Ribonuc_2-5A|PF06479.8|9.9e-44,Pkinase|PF00069.21|8.2e-37,Pkinase_Tyr|PF07714.13|3.7e-27 R_Transcript_86180:367-3087(+)
MQLQMKFIVINALWLIAFLVFCLVKLSVSEAPPPPSSTSLAKRSYDLSSSIVPANRHEAVLVATLDGTISLVEIESRKILWSVKTGLPIYSSYQASWNLDVNLKNANEHRDATYIDCGDDWNLYKHDRAKGIMERLKSAKDLIKETKGLSKNGTAVIGQMATTVFIVNAETGAVIRTVRFSESSGLGFDDGENPIVVREESKEQISITRTDYSFLAYSKTSGNVLWNVSLAEFEAESFCSDVESSIVGDLQDQIGSVYKSHSKMPKSCMRRTIVYRIRDPGFSELISGAGMITDMPRLLPGGRVLPLPGPHHLQLPMPAGELPGAHHDSNTVLGSPSMESSYVHSSEVLALPSPEVQTAQNAKATIFPESSIAHFLWWPVISGLLLLFTVSYYAIYRGVFVRENKQSDDFKSKSTTPKKKKPRRAGNSKNNSTYNNISGSPSNGDSSLAELSNLSKSTQSTFTSLINAQVNGRNIGKLWVTGTEIAKGSNGTVVLEGIYDGRPVAVKRLVRTHHDVALKEIQNLMASDQHTNIVRFHGVEFDSDFVYLSLERCLCSLSDLIYLYSESSQNATSPKVVDSNSINGCTVQLPEGLVSDKDVELWKANGYPSPQLLKLMRDVVSGIAHLHELGFIHRDLKPQNVLVVKERVLCAKLSDMGISKRLVGDVSSLTQHATGTGSSGWRSPEQILHGRQTRAVDLFSLGCVLFFCMTGGKHPFGDIFERDANIVKNQKDLFLVEHVPEAVDLITNLLDPNPEMRPKAMEVLHHPLFWNSEKRLSFLRDASDRVELEDRETDSELLEALEATAPVALGGKWDDKLESSFLTNINRYRRYKYDSVRDLLRVIRNKLNHYRELPIEIQEVLGSVPEGFDAYFTVRFPKLLIEVYRVIRVYCQEEELLGKYFKSSLL*

Click here to download the sequence:
Link to NCBI Protein BLAST