Transcript Information: R_Transcript_86196.p1


Annotated TAIR IDAT5G17920.1
Annotated Gene NameCobalamin-independent synthase family protein
Annotated Gene Symbol(s)ATCIMS, ATMETS, ATMS1
Annotation TypeOrtholog
Chromosome Positionchr5:5935771-5939195 | Forward length=765
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.880949404899
Replicate 239.883159435632
Replicate 351.085236064317
Condition 2: 8 Hour
Replicate 150.974078663541
Replicate 254.752813480286
Replicate 374.769368046127
Condition 3: 24 Hour
Replicate 175.980686771128
Replicate 258.126943991989
Replicate 366.89046198706


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86196.p1 GENE.R_Transcript_86196~~R_Transcript_86196.p1 ORF type:complete len:856 (+),score=199.34,Meth_synt_2|PF01717.14|0.056,Meth_synt_2|PF01717.14|2.5e-156,Meth_synt_1|PF08267.8|2.1e-118,Meth_synt_1|PF08267.8|1.3e+02,Meth_synt_1|PF08267.8|0.00037 R_Transcript_86196:87-2654(+)
ATGATTTCCAGATCTATACTCCAAAAAACACAAAAGCAACTCCTGTTGCCACTTACCAGGAGTTGTTGGGGGACTGGACCTGTGTCTCTCAGTAGTAGTCGTATAAATGGAGTAATGAACCAACTCTCTCCCTTTCATCCCTCTCTCACTCCTCTCTCTTTTTCTTCTTCTCCTCCTCTTTCCTTTGCCTCTCTTCGTTCTCTCTCTTTCTCTTTCACCAAACCTCGCTTCTCTTTCTCCTTTCTTCGCCTCAACGTTCGCGCCAGAACAATGGCATCACACATAGTTGGGTACCCCCGTATGGGACCGAAGAGAGAGTTGAAATTTGCATTGGAATCCTTTTGGGATGGTAAAATCAATGCTGAAGAGTTGCAAAAGGTTGCTTCTACTCTTAGGACTTCCATTTGGAAGGAGATGGCTGATGCTGGGATTAAGTATATTCCTAGCAACACTTTCTCCTACTATGACCAAGTGTTGGATACTACTGCCATGCTTGGTGCTGTTCCCCCGAGATATGGCTGGATTGGTGGTGAGATTGGGTTCGATGTTTACTTCTCCATGGCTCGAGGCAATGCCACTGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCATTACATTGTCCCTGAATTGGGCCCTGACATGAAGTTTACATATGCCTCTCACAAGGCAGTGGCTGAATACAAGGAGGCCAAGGCTCTTGGAGTTGAAACTGTTCCAGTTGTTGTTGGTCCAGTGTCTTACCTATTGTTATCAAAGCCTTCTAAGGGCATTGAGAAGTCCTTCCCTCTTCTTTCTCTGCTTGACAAAATTCTCCCTGTTTACAAGGAGGTCATATCTGAACTTAAGGCTGCTGGTGCATCATGGATTCAGTTTGACGAGCCTAAACTTGTCATGGACCTTGATGCTCACCAATTGCAAGCTTTTGCACATGCCTACTCAGAGCTAGAGTCTTCTCTATCAGGATTGAACGTTCTCATCGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATATAAAACTCTTACTTCATTGAGAGGTGTAACTGCTTACGGCTTTGACCTTGTTCGTGGAACAAAGACCCTTGATTTGATTAAGGGTGGATTTCCTTCTGGCAAGTATCTCTTTGCTGGAGTAGTGGATGGGAGGAACATCTGGGCTAATGACCTTGCGGCTTCCCTTAGTACCTTGCATGGTCTTGAGGGTCTTGTCGGGAAAGACAAGCTTGTTGTATCTACCTCATGCTCTCTTCTTCATACTGCTGTTGATCTGGTGAACGAGACTAAGTTGGATGCGGAGCTCAAGTCATGGCTGGCCTTTGCAGCTCAGAAAATTGTTGAGGTGAATGCCTTGGCTAAGGCATTGTCTGGGCAGAAAGACGAGGCTTTTTTCTCTGCAAATGCTGCAGCACAGGCTTCAAGAAAGTCTTCCCCTAGAGTCACTAATGAAGCAGTTCAAAAGGCTGCTGCTGCCTTGAGGGGATCTGATCATCGCCGCGCCACTGATGTAAGTGCCAGGTTGGTGGCTCAACAGAAGAAGCTAAACCTTCCACTCCTACCAACCACCACAATTGGATCCTTTCCTCAAACCATGGACCTCAGAAGAGTCCGCCGTGAATACAAGGCCAACAAGATCTCTGAGGATGAGTATGTGAAGGCTATTAAAGAGGAGATTAGCAAGGTTGTTCAACTCCAAGAGGAACTTGACATTGATGTTTTGGTCCATGGAGAGCCAGAGAGAAATGACATGGTTGAGTACTTTGGCGAGCAACTATCTGGTTTTGCCTTCACTGTTAATGGGTGGGTCCAATCTTATGGGTCTCGATGTGTCAAGCCACCTATCATCTATGGTGATGTAAGTCGACCCAAGGCCATGACAGTCTTCTGGTCCACGATGGCTCAGAGCATGACAAAACGCCCTATGAAGGGAATGCTTACGGGCCCTGTAACCATTTTGAACTGGTCCTTTGTCCGAAATGACCAACCTAGGTTTGAGACGTGCTACCAGATCGCTTTGGCCATAAAGGATGAGGTTGAGGATCTTGAGAAGGCTGGGATCGCTGTCATCCAAATTGATGAGGCTGCCTTAAGAGAGGGTTTGCCTTTGAGGAAGTCTGAGCAGCCTTTCTATCTAGATTGGGCTGTTCACTCTTTCAGGATAACAAACGTTGGGGTTCAAGACACAACCCAGATTCACACACACATGTGCTACTCCAATTTCAATGACATTATCCACTCAATCATCAACATGGATGCTGACGTAATCACAATCGAGAACTCAAGATCAGATGAGAAACTTCTCTCTGTCTTCCGCGAGGGTGTGAAGTACGGTGCTGGAATTGGCCCCGGTGTGTATGATATCCACTCACCAAGGATCCCATCTACTGACGAAATTGTGGACCGTATCACAAAAATGCTTGCAGTCCTGGAATCTCGCATCCTTTGGGTTAACCCAGACTGTGGGCTCAAGACCCGAAAGTACTCCGAAGTCAAGCCTGCTCTCAGCAACATGGTTGCTGCTGCTAAGATTGCCCGCACTCAGCACGCCAGTGCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86196.p1 GENE.R_Transcript_86196~~R_Transcript_86196.p1 ORF type:complete len:856 (+),score=199.34,Meth_synt_2|PF01717.14|0.056,Meth_synt_2|PF01717.14|2.5e-156,Meth_synt_1|PF08267.8|2.1e-118,Meth_synt_1|PF08267.8|1.3e+02,Meth_synt_1|PF08267.8|0.00037 R_Transcript_86196:87-2654(+)
MISRSILQKTQKQLLLPLTRSCWGTGPVSLSSSRINGVMNQLSPFHPSLTPLSFSSSPPLSFASLRSLSFSFTKPRFSFSFLRLNVRARTMASHIVGYPRMGPKRELKFALESFWDGKINAEELQKVASTLRTSIWKEMADAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWIGGEIGFDVYFSMARGNATVPAMEMTKWFDTNYHYIVPELGPDMKFTYASHKAVAEYKEAKALGVETVPVVVGPVSYLLLSKPSKGIEKSFPLLSLLDKILPVYKEVISELKAAGASWIQFDEPKLVMDLDAHQLQAFAHAYSELESSLSGLNVLIETYFADVPAEAYKTLTSLRGVTAYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLHGLEGLVGKDKLVVSTSCSLLHTAVDLVNETKLDAELKSWLAFAAQKIVEVNALAKALSGQKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALRGSDHRRATDVSARLVAQQKKLNLPLLPTTTIGSFPQTMDLRRVRREYKANKISEDEYVKAIKEEISKVVQLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSTMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGIAVIQIDEAALREGLPLRKSEQPFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTDEIVDRITKMLAVLESRILWVNPDCGLKTRKYSEVKPALSNMVAAAKIARTQHASAK*

Click here to download the sequence:
Link to NCBI Protein BLAST