Transcript Information: R_Transcript_86201.p1


Annotated TAIR IDAT5G17920.1
Annotated Gene NameCobalamin-independent synthase family protein
Annotated Gene Symbol(s)ATCIMS, ATMETS, ATMS1
Annotation TypeOrtholog
Chromosome Positionchr5:5935771-5939195 | Forward length=765
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9621933026323
Replicate 20.78736126561118
Replicate 31.5462047877403
Condition 2: 8 Hour
Replicate 11.622188552755
Replicate 22.0963326726112
Replicate 33.9933543364851
Condition 3: 24 Hour
Replicate 11.0331013252467
Replicate 21.3784536806611
Replicate 32.5170860389932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86201.p1 GENE.R_Transcript_86201~~R_Transcript_86201.p1 ORF type:complete len:800 (+),score=179.88,Meth_synt_1|PF08267.8|1.8e-118,Meth_synt_1|PF08267.8|1.2e+02,Meth_synt_1|PF08267.8|0.0079,Meth_synt_2|PF01717.14|0.051,Meth_synt_2|PF01717.14|4.3e-102 R_Transcript_86201:87-2486(+)
ATGATTTCCAGATCTATACTCCAAAAAACACAAAAGCAACTCCTGTTGCCACTTACCAGGAGTTGTTGGGGGACTGGACCTGTGTCTCTCAGTAGTAGTCGTATAAATGGAGTAATGAACCAACTCTCTCCCTTTCATCCCTCTCTCACTCCTCTCTCTTTTTCTTCTTCTCCTCCTCTTTCCTTTGCCTCTCTTCGTTCTCTCTCTTTCTCTTTCACCAAACCTCGCTTCTCTTTCTCCTTTCTTCGCCTCAACGTTCGCGCCAGAACAATGGCATCACACATAGTTGGGTACCCCCGTATGGGACCGAAGAGAGAGTTGAAATTTGCATTGGAATCCTTTTGGGATGGTAAAATCAATGCTGAAGAGTTGCAAAAGGTTGCTTCTACTCTTAGGACTTCCATTTGGAAGGAGATGGCTGATGCTGGGATTAAGTATATTCCTAGCAACACTTTCTCCTACTATGACCAAGTGTTGGATACTACTGCCATGCTTGGTGCTGTTCCCCCGAGATATGGCTGGATTGGTGGTGAGATTGGGTTCGATGTTTACTTCTCCATGGCTCGAGGCAATGCCACTGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCATTACATTGTCCCTGAATTGGGCCCTGACATGAAGTTTACATATGCCTCTCACAAGGCAGTGGCTGAATACAAGGAGGCCAAGGCTCTTGGAGTTGAAACTGTTCCAGTTGTTGTTGGTCCAGTGTCTTACCTATTGTTATCAAAGCCTTCTAAGGGCATTGAGAAGTCCTTCCCTCTTCTTTCTCTGCTTGACAAAATTCTCCCTGTTTACAAGGAGGTCATATCTGAACTTAAGGCTGCTGGTGCATCATGGATTCAGTTTGACGAGCCTAAACTTGTCATGGACCTTGATGCTCACCAATTGCAAGCTTTTGCACATGCCTACTCAGAGCTAGAGTCTTCTCTATCAGGATTGAACGTTCTCATCGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATATAAAACTCTTACTTCATTGAGAGGTGTAACTGCTTACGGCTTTGACCTTGTTCGTGGAACAAAGACCCTTGATTTGATTAAGGGTGGATTTCCTTCTGGCAAGTATCTCTTTGCTGGAGTAGTGGATGGGAGGAACATCTGGGCTAATGACCTTGCGGCTTCCCTTAGTACCTTGCATGGTCTTGAGGGTCTTGTCGGGAAAGACAAGCTTGTTGTATCTACCTCATGCTCTCTTCTTCATACTGCTGTTGATCTGGTGAACGAGACTAAGTTGGATGCGGAGCTCAAGTCATGGCTGGCCTTTGCAGCTCAGAAAATTGTTGAGGTGAATGCCTTGGCTAAGGCATTGTCTGGGCAGAAAGACGAGGCTTTTTTCTCTGCAAATGCTGCAGCACAGGCTTCAAGAAAGTCTTCCCCTAGAGTCACTAATGAAGCAGTTCAAAAGGCTGCTGCTGCCTTGAGGGGATCTGATCATCGCCGCGCCACTGATGTAAGTGCCAGGTTGGTGGCTCAACAGAAGAAGCTAAACCTTCCACTCCTACCAACCACCACAATTGGATCCTTTCCTCAAACCATGGACCTCAGAAGAGTCCGCCGTGAATACAAGGCCAACAAGATCTCTGAGGATGAGTATGTGAAGGCTATTAAAGAGGAGATTAGCAAGGTTGTTCAACTCCAAGAGGAACTTGACATTGATGTTTTGGTCCATGGAGAGCCAGAGAGAAATGACATGGTTGAGTACTTTGGCGAGCAACTATCTGGTTTTGCCTTCACTGTTAATGGGTGGGTCCAATCTTATGGGTCTCGATGTGTCAAGCCACCTATCATCTATGGTGATGTAAGTCGACCCAAGGCCATGACAGTCTTCTGGTCCACGATGGCTCAGAGCATGACAAAACGCCCTATGAAGGGAATGCTTACGGGCCCTGTAACCATTTTGAACTGGTCCTTTGTCCGAAATGACCAACCTAGGTTTGAGACGTGCTACCAGATCGCTTTGGCCATAAAGGATGAGGTTGAGGATCTTGAGAAGGCTGGGATCGCTGTCATCCAAATTGATGAGGCTGCCTTAAGAGAGGGTTTGCCTTTGAGGAAGTCTGAGCAGCCTTTCTATCTAGATTGGGCTGTTCACTCTTTCAGGATAACAAACGTTGGGGTTCAAGACACAACCCAGGTTCTTACTTGTCTATTTCTAAGGAAATGTTTCTCTTGTTGGTACACTCAACGTATGATCTTAAGGCGTTCCAAAGTCAATAAAGCATATGGTTTTGTAGCTCCTTTGTGCATGTTTGATGTACTGATGACTTTATGTTGTTGGGCAATTTGTTTTGATGCGGTAGATTCACACACACATGTGCTACTCCAATTTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86201.p1 GENE.R_Transcript_86201~~R_Transcript_86201.p1 ORF type:complete len:800 (+),score=179.88,Meth_synt_1|PF08267.8|1.8e-118,Meth_synt_1|PF08267.8|1.2e+02,Meth_synt_1|PF08267.8|0.0079,Meth_synt_2|PF01717.14|0.051,Meth_synt_2|PF01717.14|4.3e-102 R_Transcript_86201:87-2486(+)
MISRSILQKTQKQLLLPLTRSCWGTGPVSLSSSRINGVMNQLSPFHPSLTPLSFSSSPPLSFASLRSLSFSFTKPRFSFSFLRLNVRARTMASHIVGYPRMGPKRELKFALESFWDGKINAEELQKVASTLRTSIWKEMADAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWIGGEIGFDVYFSMARGNATVPAMEMTKWFDTNYHYIVPELGPDMKFTYASHKAVAEYKEAKALGVETVPVVVGPVSYLLLSKPSKGIEKSFPLLSLLDKILPVYKEVISELKAAGASWIQFDEPKLVMDLDAHQLQAFAHAYSELESSLSGLNVLIETYFADVPAEAYKTLTSLRGVTAYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLHGLEGLVGKDKLVVSTSCSLLHTAVDLVNETKLDAELKSWLAFAAQKIVEVNALAKALSGQKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALRGSDHRRATDVSARLVAQQKKLNLPLLPTTTIGSFPQTMDLRRVRREYKANKISEDEYVKAIKEEISKVVQLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSTMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGIAVIQIDEAALREGLPLRKSEQPFYLDWAVHSFRITNVGVQDTTQVLTCLFLRKCFSCWYTQRMILRRSKVNKAYGFVAPLCMFDVLMTLCCWAICFDAVDSHTHVLLQFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST