Transcript Information: R_Transcript_8622.p1


Annotated TAIR IDAT1G27460.1
Annotated Gene Nameno pollen germination related 1
Annotated Gene Symbol(s)NPGR1
Annotation TypeOrtholog
Chromosome Positionchr1:9534977-9537424 | Forward length=694
E-Value6.2E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2097926441448
Replicate 24.9351526708684
Replicate 36.4992690815231
Condition 2: 8 Hour
Replicate 15.1083167483822
Replicate 25.5046955297494
Replicate 38.5330241859399
Condition 3: 24 Hour
Replicate 17.7590363787651
Replicate 27.2086033926087
Replicate 38.2497468291365


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8622.p1 GENE.R_Transcript_8622~~R_Transcript_8622.p1 ORF type:complete len:719 (+),score=153.07,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|2.7e+02,TPR_1|PF00515.24|85,TPR_1|PF00515.24|71,TPR_1|PF00515.24|4.7e+02,TPR_1|PF00515.24|1.2e+02,TPR_1|PF00515.24|30,TPR_1|PF00515.24|91,TPR_1|PF00515.24|60,TPR_1|PF00515.24|1.4e+03,TPR_1|PF00515.24|0.02,TPR_11|PF13414.2|1.8,TPR_11|PF13414.2|5.7e+03,TPR_11|PF13414.2|47,TPR_11|PF13414.2|90,TPR_11|PF13414.2|4.8e+03,TPR_11|PF13414.2|36,TPR_11|PF13414.2|0.15,TPR_11|PF13414.2|4.5,TPR_11|PF13414.2|0.011,TPR_2|PF07719.13|0.35,TPR_2|PF07719.13|4.2e+03,TPR_2|PF07719.13|9.6e+02,TPR_2|PF07719.13|40,TPR_2|PF07719.13|4.3,TPR_2|PF07719.13|2.9e+03,TPR_2|PF07719.13|3.7e+02,TPR_2|PF07719.13|1.9e+02,TPR_2|PF07719.13|31,TPR_2|PF07719.13|19,TPR_2|PF07719.13|2.5e+03,TPR_2|PF07719.13|0.49,TPR_16|PF13432.2|0.0026,TPR_16|PF13432.2|2.2e+03,TPR_16|PF13432.2|1.7e+03,TPR_16|PF13432.2|3.1,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|38,TPR_16|PF13432.2|2.3e+03,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|23,TPR_19|PF14559.2|0.034,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|1e+04,TPR_19|PF14559.2|81,TPR_19|PF14559.2|1.9e+02,TPR_19|PF14559.2|13,TPR_19|PF14559.2|1.7e+03,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|0.69,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|6.3e+02,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|6.6,TPR_14|PF13428.2|3.4e+02,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|1.2e+02,TPR_12|PF13424.2|0.86,TPR_12|PF13424.2|1.1e+03,TPR_12|PF13424.2|1.9e+03,TPR_12|PF13424.2|3.4e+03,TPR_12|PF13424.2|45,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|0.14,TPR_12|PF13424.2|65,TPR_12|PF13424.2|3.4e+02,TPR_12|PF13424.2|1.3e+02,TPR_17|PF13431.2|1.3e+02,TPR_17|PF13431.2|2.8e+03,TPR_17|PF13431.2|7.7e+03,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|5.9e+03,TPR_17|PF13431.2|1.1e+03,TPR_17|PF13431.2|4e+02,TPR_17|PF13431.2|0.0078 R_Transcript_8622:498-2654(+)
ATGTTGTGTGCTTGCTCAGGAGAGCAGTTCAAATTCGAAGAACCGGCACCCAGGTCACCGGAATCATTGGCAACAAGGGACTTCTCGGCGAGTGGAATATCGTCGAGGACCGGAGATTTGAAGAGCATTTCTTCAAGGACTGCTGGTGATTTGGCGTCCAAATACGAGGATGCTCATGTTGATGAAGTTGAATCCACGTTGAAGGAAGCTCTTTCGTTGAATTACGAGGAAGCGAGGGCTCTACTGGGAAGGATAGAGTACCAGAAGGGGAATTACGATGCCGCCCTCCAGCTTTTTCAAGGGATTGACATCAGGGGATTATCTGCAAGGATAACTACTGCCATTTCTGAGCGCACTCGGCCAAGGAAGCCACGATCCAAGGCCGATAATTCACTTGCTGGTGTAATGTCTTGGCATTCAGTGAGTCTGCTTCTTGAAGCAATTCTACTCAAGGCTAAGGTCTTGGAGGAACTCGGGAGAATTACGGAGGGCGCAAAGGAGTGCAAACTGATTATAGACATAGTTGAATCAGCATTACCTAATGGGATGCCAGCAAGAATTAGTCAAGATAACAAGATGCAGGAGATGTTTCACAAGGCACTAGAGCTGCTTCCTAAGCTATGGAAAGATGCAGGGTGCCTTGATGAAGCTGTCATAGCATATCGCCGAGCTCTTGTGAAGCCCTGGAATCTGGATCCTCAGAGATTAGCTAGTGTTCAGAAGGATTTAGCTTCCATATTGCTTTACGGTGGTGTTGAAACGGAGCTTCCTCGACAACTCCAAATATGGGGTCCAATTGCGCCTAAGAATAATCTCGAGGAAGCAATCCTTTTGCTCTTTGTGCTTGTTAGAAAAGCAGCAAGCAAGGAAATTAAGTGGGACCCAGACATCATAGATAATCTCTCTTTTGCACTCTCAATGTGTGGAGGGTTTGAGTTTCTTGCTCATCATGTGGAGGAAGTCCTTCCCGGTATTTATAACAGAGCTGAAAGATGGTACATCCTTGCGCTTTGTTACTATGCTGCTGAGCAGAATGATGTGGCTTTAGATCTAGTTAGAAAAATTTCGGGACACTCCGAGTCCAAGCACAAACCCGACATCCCTTCTCTTTTACTAGGAGCAAAGCTATGTGCAAATGATCCAAAGCTTGCTCGGGAAGGGATAAATTATTCTCACAAGGTTGTCGATTTGGCTGCTGATGGGAACAACCATTTTATGGCTCAAGCACATAAGTTTCTGGGAATGTGTTATGCTAATGCCGCTAGAGTATCTATATCAAATTCAGAGAGGGAGGTATTTAGGAAGGAGACTTTGAAGCACCTAAAGACCGCTGCTTCAGTTGAGGAGGATCCTGAGTTGATGTTCAACCTGGGTATGGAAAATGCCATACAATGGAACCTCGATGCTGGTTTTGGCTATACCAAACTGTCATCCAACATGGTTGCAGGGAGCTCTGTAAGAGGATGGAAGCTATTGGCTTTGATAGCTTCTGCAAAGCAGCAGTTGGATGATGCTGAAGACATAGTCGATATTGCTTTGGATGAAACCACTGGGATGGATCATTTAAAACTTCTGAGGTTAAAGGCTGTCATTCAGATCGCTCAAGAAAACCCCAAGCAAGCTATAGAGAATTATGTAGTTTTGTTGGCACAAATTCAAGCGGCAAAGCAACAGAAAATCGAAAATTCCTGTCTCAAGGCATCAGAAATGAAGAATTTGGAAATGGAAGCTTGGCAAGATTTGGCCAACTTGTACACAGGGCTTGAATCATGGGGAGATGCCGAGATCTGCGTGAAAAAGGCCAGGTTAATCGACTTTTATAGCCCTCAAAGTTGGCATGCAGCAGGTATACTACTGAAGGCCCAATCTCTATTCAGTGAAGCGCTAGTTGCTTTCTCGGTCTCACTGTCAATAGAGCCAAATCATATCCCGAGTTTAGTTTCAGCCGCAGAAATTTTGATGGAACTTGGTGGCTCTTCTCTCCCTATAGCCAAAAGCTTCTTAATGAATGCTCTCCAGTTAGAGCCGACAAATTATGATGCCTGGTTGAGCCTTGGATTTATTTTAAAGAAGGAAGGTTTATCATCACAAGCTGCAGATTGTTTCCAAGCTGCATGTGAATTGAAGTCCACAGCACCAGTTCAACCATTTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8622.p1 GENE.R_Transcript_8622~~R_Transcript_8622.p1 ORF type:complete len:719 (+),score=153.07,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|2.7e+02,TPR_1|PF00515.24|85,TPR_1|PF00515.24|71,TPR_1|PF00515.24|4.7e+02,TPR_1|PF00515.24|1.2e+02,TPR_1|PF00515.24|30,TPR_1|PF00515.24|91,TPR_1|PF00515.24|60,TPR_1|PF00515.24|1.4e+03,TPR_1|PF00515.24|0.02,TPR_11|PF13414.2|1.8,TPR_11|PF13414.2|5.7e+03,TPR_11|PF13414.2|47,TPR_11|PF13414.2|90,TPR_11|PF13414.2|4.8e+03,TPR_11|PF13414.2|36,TPR_11|PF13414.2|0.15,TPR_11|PF13414.2|4.5,TPR_11|PF13414.2|0.011,TPR_2|PF07719.13|0.35,TPR_2|PF07719.13|4.2e+03,TPR_2|PF07719.13|9.6e+02,TPR_2|PF07719.13|40,TPR_2|PF07719.13|4.3,TPR_2|PF07719.13|2.9e+03,TPR_2|PF07719.13|3.7e+02,TPR_2|PF07719.13|1.9e+02,TPR_2|PF07719.13|31,TPR_2|PF07719.13|19,TPR_2|PF07719.13|2.5e+03,TPR_2|PF07719.13|0.49,TPR_16|PF13432.2|0.0026,TPR_16|PF13432.2|2.2e+03,TPR_16|PF13432.2|1.7e+03,TPR_16|PF13432.2|3.1,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|38,TPR_16|PF13432.2|2.3e+03,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|23,TPR_19|PF14559.2|0.034,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|1e+04,TPR_19|PF14559.2|81,TPR_19|PF14559.2|1.9e+02,TPR_19|PF14559.2|13,TPR_19|PF14559.2|1.7e+03,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|0.69,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|6.3e+02,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|6.6,TPR_14|PF13428.2|3.4e+02,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|1.2e+02,TPR_12|PF13424.2|0.86,TPR_12|PF13424.2|1.1e+03,TPR_12|PF13424.2|1.9e+03,TPR_12|PF13424.2|3.4e+03,TPR_12|PF13424.2|45,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|0.14,TPR_12|PF13424.2|65,TPR_12|PF13424.2|3.4e+02,TPR_12|PF13424.2|1.3e+02,TPR_17|PF13431.2|1.3e+02,TPR_17|PF13431.2|2.8e+03,TPR_17|PF13431.2|7.7e+03,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|5.9e+03,TPR_17|PF13431.2|1.1e+03,TPR_17|PF13431.2|4e+02,TPR_17|PF13431.2|0.0078 R_Transcript_8622:498-2654(+)
MLCACSGEQFKFEEPAPRSPESLATRDFSASGISSRTGDLKSISSRTAGDLASKYEDAHVDEVESTLKEALSLNYEEARALLGRIEYQKGNYDAALQLFQGIDIRGLSARITTAISERTRPRKPRSKADNSLAGVMSWHSVSLLLEAILLKAKVLEELGRITEGAKECKLIIDIVESALPNGMPARISQDNKMQEMFHKALELLPKLWKDAGCLDEAVIAYRRALVKPWNLDPQRLASVQKDLASILLYGGVETELPRQLQIWGPIAPKNNLEEAILLLFVLVRKAASKEIKWDPDIIDNLSFALSMCGGFEFLAHHVEEVLPGIYNRAERWYILALCYYAAEQNDVALDLVRKISGHSESKHKPDIPSLLLGAKLCANDPKLAREGINYSHKVVDLAADGNNHFMAQAHKFLGMCYANAARVSISNSEREVFRKETLKHLKTAASVEEDPELMFNLGMENAIQWNLDAGFGYTKLSSNMVAGSSVRGWKLLALIASAKQQLDDAEDIVDIALDETTGMDHLKLLRLKAVIQIAQENPKQAIENYVVLLAQIQAAKQQKIENSCLKASEMKNLEMEAWQDLANLYTGLESWGDAEICVKKARLIDFYSPQSWHAAGILLKAQSLFSEALVAFSVSLSIEPNHIPSLVSAAEILMELGGSSLPIAKSFLMNALQLEPTNYDAWLSLGFILKKEGLSSQAADCFQAACELKSTAPVQPFV*

Click here to download the sequence:
Link to NCBI Protein BLAST