Transcript Information: R_Transcript_86235.p1


Annotated TAIR IDAT5G40860.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16370470-16371985 | Forward length=246
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1316153573764
Replicate 23.8854363759697
Replicate 34.4835251522718
Condition 2: 8 Hour
Replicate 16.4482348971393
Replicate 26.8435439086902
Replicate 37.9453669263616
Condition 3: 24 Hour
Replicate 14.9837232771884
Replicate 24.5523310165604
Replicate 33.8946093748928


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86235.p1 GENE.R_Transcript_86235~~R_Transcript_86235.p1 ORF type:complete len:281 (+),score=44.90 R_Transcript_86235:203-1045(+)
ATGGGATCATGTGCATCAATCCATAAAAGTTCAGGGCCTGCTCTGAAACTACAGATGTCTTCAATCATACCTGATGAAAAATCGGAGAAAACCACCCCTGTCATTGTTGACTGTCCGATAAATTCTCACTCACTTCGTTTTAAGTCTCAAGTTTCTCCTTTCAACTCTGTTTCAAGTTACCGTAGTTATGGTGGGAGTAAGGATGAAATCTTTTACGATAGCCAAGCTTGGCTAGACTCAGATTGTGAGGATGATTTTCATAGTGTAAATGGAGATTTCACCCCCTCCCGAAATAGTACTCCAGTCCATAGTGCGATAGGGAGCTCGCGATTCAGTAGAACATTTTCACCTCAAGTCAACAAGGCTCTTTTTGATGGTAAACCACCTCGTAGCGCATCAAACAGATCTAGAGGCGGTACTCCACTTCATCGGAGCAGTTCAGCCTCTACTACAGATCAAGTTAATGGACCGAATCTTCTTGAAGGCAAGTCTCCTTTAAATCCAGATTCATCCTCAACAACAACAACGTCTAAGAAGAAGAAGAAACTTGCTGATCTTTTCCGAGAAAGCATCAGGGAGCGTAATGGTTTCGCCTTCAATGAAGATGATGATAATATTATGAGTAGTACTTCTCCAGCGTTGCCACCCAAATCAGCTAATGGAACACCGTCATATGTTTCGGGCACCAATTCAGTGTCCAGCAGTGGGAAAAGAACCCCTTTAAGTACTGATGATTATTCAGGTCCTTGTCAGAAGGACAAACCACTCAAGGCTAAGGCTGCACAATGCTGCTTTCCCAGATTGGTTTCGAGTCGCAGCCTTCGATCGAAAGATGAAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86235.p1 GENE.R_Transcript_86235~~R_Transcript_86235.p1 ORF type:complete len:281 (+),score=44.90 R_Transcript_86235:203-1045(+)
MGSCASIHKSSGPALKLQMSSIIPDEKSEKTTPVIVDCPINSHSLRFKSQVSPFNSVSSYRSYGGSKDEIFYDSQAWLDSDCEDDFHSVNGDFTPSRNSTPVHSAIGSSRFSRTFSPQVNKALFDGKPPRSASNRSRGGTPLHRSSSASTTDQVNGPNLLEGKSPLNPDSSSTTTTSKKKKKLADLFRESIRERNGFAFNEDDDNIMSSTSPALPPKSANGTPSYVSGTNSVSSSGKRTPLSTDDYSGPCQKDKPLKAKAAQCCFPRLVSSRSLRSKDED*

Click here to download the sequence:
Link to NCBI Protein BLAST