Transcript Information: R_Transcript_86250.p1


Annotated TAIR IDAT5G27220.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9578757-9582752 | Forward length=1181
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7929639585151
Replicate 21.1833663680683
Replicate 31.3648136732007
Condition 2: 8 Hour
Replicate 11.9320569765137
Replicate 21.9444245079292
Replicate 32.8352757329751
Condition 3: 24 Hour
Replicate 12.8466202198603
Replicate 21.5982071659839
Replicate 32.3967212861659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86250.p1 GENE.R_Transcript_86250~~R_Transcript_86250.p1 ORF type:complete len:621 (+),score=133.74,Frigida|PF07899.7|1.5e-35,Frigida|PF07899.7|2.8e-51 R_Transcript_86250:1495-3357(+)
ATGAAGGTTTTGGAGGTGAAAGAGAAGCATCTAAATGAGCAAATGGAATTGAGGGAAAAACAAATGAACGAGGGCCTTACGGCTCTTGAATTAATAGTGAAACAAGTAGATGAGTTTTCCAAAGGGTTGGTACAGAAATGTTTCCAAGCAATGACAGTAAGAGAGGAGCAAATCAATGAGTGTTTTCAATGTCTTGAATTAAAGGCGAAGCAAATTCGTGAGCGTTATCAAGCAGTAGAGTTGAAAGAAAAGAAGTTAAAGAGGCGTCTTGCAGTATTAGATATTAGGGAGCAGAAAATCAATGAGCATTATCATAGTTTGGGAGCACAAGAATTGAAACCCAAGCGTATGTGTGACCATTGCAACATGCTAGAACTGAAGAACATACAAGGTTGTGAGGTTTCAGTGTTGGAAGACAAACAAATCAATGAAGATTGCAAGGTGGTGGGGTTGAGGGAGAAGAAATTGACTGAAACTGTAAATTTGCAGGTCGAGGCTTTTACCTCAGACAACAACTTGAGGGTTGGTGACGATGGGGATGAAAATATAATCCTTAATCTTTGCAAAGCAATGAATGGGAAAGCCTTGCAAATGTTTTTGAATGAGAGGGTTAATGAACATGAATCAATGGGAGAAAAAGTTGGTAATGCACTTAAGCTTTCAATTGACCCACCAAAGCTGGTGTTAACTGCTGTTGATAGCTTTTTCCCATCAAACATCAAGAGCAGTGACATGCTACATAAAACAAGTGTTGTTAGGAGCAGTTGTGTGTTCCTGTTGGAGCAGTTGATGATCATGAAACCCATTGTCAGTGAAGCTGTGAGAATAGAGGCTGTGAAAGTGGCGACCGGGTGGAGGGAGAAAGTGAAGGATGAGGGAGAGACTGATGTGGTGGTGCTGGGATTTTTACTGTTCTTAGCCTCGTATAGATTGGTGTCGAATTTTGAGAGGGATGAGCTTCGGCGACTTTACAGGAGGATTGATCATCATAGATTGGCACCCGAATTATGTCTTAAACTTGGCCTGATGAAAGCAAAGACTGTTAACAACAACCCGCCACAAAGGAAAATTGAGCCATGTCAGCCAGAAACATTGGAAGTAACTAGTAGATCTAGAGTAGATTCTAGTTCCACAAATGTTTCAAGTGATATTCAGTTGTTGTGCAGAAATATGGATTTAAATGGTGTGACATCTTATCTCATTAATCATGCGAAAGAGAGTGATTTATTGCATGAACAAATTCCGGATGCTCTTCGGTTAGCTGCAGATCCAGCTAAGCTTGTTCTTGATGTGACTAGAAGGTTTCACCAATTGAAGTTGGGCAGTGATCTAATTGATGATTGTAAAGCTTGTTTCATGCTGTTGTTAGTTAAGTTGATGAACCTACAAGCAGATTTGACACCTCATGTGAAAGATGAAGCCAGAAAATTTGCTGCAGTTTGGAGAGATTCGTTGGCTGAACTGGGCAATACCTCTTTGGAAAACTTTAGCTTTTTGCAATTTTTAGCGTCATACAAGTTAGAAAGGTTATACAAAACAAATGAGCTTCTTTCACTTTTTGAAACTATATACAGTGATAGTAAGCTGTGTTGGCCGGAGCAAATCCCATTTTTATGCAATGCATTGGAACTGGCAGAGAAGATTCCAGGTCTTATCCAATCTATTATTAGGAGAAATGAACAGGTTCAGGTAGTCCGGTACATATGTTCACTTAAGATGGAATATGCTCTCCCACCAGTCACTCTTTTGAAAGCCTATTTGGATATCATCAGGAAGAGAGTAGAAGAGATATGCAGGAATGCCAATGATAATGCTCAGAACTTTGGTGAGAACATCTCTTTGGCGTCTTTGGGTGCTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86250.p1 GENE.R_Transcript_86250~~R_Transcript_86250.p1 ORF type:complete len:621 (+),score=133.74,Frigida|PF07899.7|1.5e-35,Frigida|PF07899.7|2.8e-51 R_Transcript_86250:1495-3357(+)
MKVLEVKEKHLNEQMELREKQMNEGLTALELIVKQVDEFSKGLVQKCFQAMTVREEQINECFQCLELKAKQIRERYQAVELKEKKLKRRLAVLDIREQKINEHYHSLGAQELKPKRMCDHCNMLELKNIQGCEVSVLEDKQINEDCKVVGLREKKLTETVNLQVEAFTSDNNLRVGDDGDENIILNLCKAMNGKALQMFLNERVNEHESMGEKVGNALKLSIDPPKLVLTAVDSFFPSNIKSSDMLHKTSVVRSSCVFLLEQLMIMKPIVSEAVRIEAVKVATGWREKVKDEGETDVVVLGFLLFLASYRLVSNFERDELRRLYRRIDHHRLAPELCLKLGLMKAKTVNNNPPQRKIEPCQPETLEVTSRSRVDSSSTNVSSDIQLLCRNMDLNGVTSYLINHAKESDLLHEQIPDALRLAADPAKLVLDVTRRFHQLKLGSDLIDDCKACFMLLLVKLMNLQADLTPHVKDEARKFAAVWRDSLAELGNTSLENFSFLQFLASYKLERLYKTNELLSLFETIYSDSKLCWPEQIPFLCNALELAEKIPGLIQSIIRRNEQVQVVRYICSLKMEYALPPVTLLKAYLDIIRKRVEEICRNANDNAQNFGENISLASLGAV*

Click here to download the sequence:
Link to NCBI Protein BLAST