Transcript Information: R_Transcript_86260.p1


Annotated TAIR IDAT5G16160.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5275813-5276576 | Reverse length=133
E-Value8.6E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.531830830527
Replicate 214.577049333608
Replicate 317.070626106687
Condition 2: 8 Hour
Replicate 114.816287706932
Replicate 216.806267880636
Replicate 317.226687786227
Condition 3: 24 Hour
Replicate 113.01429836475
Replicate 211.238348479275
Replicate 314.498861703422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86260.p1 GENE.R_Transcript_86260~~R_Transcript_86260.p1 ORF type:5prime_partial len:157 (+),score=30.61 R_Transcript_86260:3-473(+)
CTGACTAGGATACGATGTAAACGTTTCTGTACGGCAGGAATAAGGAATTCTGAGGTTTCGTGGAGAGAGAGAATGGAGGAAAATAAGAAAAGAGAAGCAGCAGCTATGGCATCAAACTCCTGTCCTAGACCCCATCTAAAATCTGGTGGGGTCACCCAAGATCAGCTCAGTAAATTCCGAGAATTGCAAAGGAGACGGTTACAATTGTCGTTGAAATCAAAGAACAAAAGGAAGCCCAAAGGTTCATCTGAAGCTAAAATCAAACTTACAGGTGAGGATCTTGATATGAAAGGCTCTCTGGATGAAAATACAGCTCAGGAATTGACAGATTCAAGTGCTAGCGACAGCTCGACAACCACTAAAACATCGGCCTCATCTCTCCAAGTTGATGTGCATCCTGTATTGAAGAAAAAAAAGTTGCATTGGGGGCTAGACACAAAGGAAAGGTGGGAAAGAAAAGCCAACATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86260.p1 GENE.R_Transcript_86260~~R_Transcript_86260.p1 ORF type:5prime_partial len:157 (+),score=30.61 R_Transcript_86260:3-473(+)
LTRIRCKRFCTAGIRNSEVSWRERMEENKKREAAAMASNSCPRPHLKSGGVTQDQLSKFRELQRRRLQLSLKSKNKRKPKGSSEAKIKLTGEDLDMKGSLDENTAQELTDSSASDSSTTTKTSASSLQVDVHPVLKKKKLHWGLDTKERWERKANM*

Click here to download the sequence:
Link to NCBI Protein BLAST