Transcript Information: R_Transcript_86379.p1


Annotated TAIR IDAT4G28890.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14256437-14257735 | Reverse length=432
E-Value4.2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.538501985177
Replicate 210.062377935358
Replicate 38.5576114038456
Condition 2: 8 Hour
Replicate 16.2831653449535
Replicate 24.7253184268166
Replicate 35.2742415764898
Condition 3: 24 Hour
Replicate 19.9628220044754
Replicate 214.897703175145
Replicate 36.7727991861343


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86379.p1 GENE.R_Transcript_86379~~R_Transcript_86379.p1 ORF type:3prime_partial len:265 (+),score=18.32,zf-RING_2|PF13639.2|2.9e-12,zf-RING_11|PF17123.1|2.6e+03,zf-RING_11|PF17123.1|2e-08,zf-RING_11|PF17123.1|1.7e+03,zf-rbx1|PF12678.3|8.3e+03,zf-rbx1|PF12678.3|8.6e-08 R_Transcript_86379:285-1076(+)
ATGGAAACTCCCAAACTCACAATACTACTATTGCTAGTCATGTACACATCCTTCCTTGTTTACACTTCCTTCCAACACAACTATTCAGCTTGCAAATTGAGAATCAACAAGTACACTTCGGAGCGTTGTTCTGGTAACTTCAGCCAAGAGATTTTGATCCTTGAGGATCCGAATAGGATCCGCTTGGCAAAGTGGATCCAGTCTCTTGATCTCTCAAGAAGAAGGCCAAATAAGGTGGCTTACATGTGGTCATTGTTGACAAAACTTGATCACGCATTGTGCAACTTTGCAGGAGGAAGATGCGGTTTAGAGTCTAGTGCTGAGCTTGTATGGACAGGAATGTTGATGGTTTTGCCAGCTCATCTCTTAATCTCGGGGTTGGTTGTGTTCGTGATCTTATCTATTATCGGTTCGTTGTGCTTGATGAGTGTGAAGGAGCATCACTATGTCGAATGGACAACGAGTGATACCAACATACTAGAACTTATTGGTACGCCATCAGCTGAGCAGCAACTAGTTATCAACAACGGCCTTGACCAGCATATCATTGACACATACTCAAAGGTTGTGCTAAACAAGAGCAATCCGTGTCGTCCAAATTACAACAACAATGTCTGTTGGATATGTCTAATGGAGTACCAAGACGAGGAGGCGCTGAGAAGCCTGCCAGGTTGCCAACATTTATTTCATGTCGTTTGCATCGATCAATGGCTTCGTTTGAAAGCTGTATGCCCTGTTTGTCGCCATTCTCTACACCCTGCTACTCAAGCACAAGCTGATCACAAGTACTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86379.p1 GENE.R_Transcript_86379~~R_Transcript_86379.p1 ORF type:3prime_partial len:265 (+),score=18.32,zf-RING_2|PF13639.2|2.9e-12,zf-RING_11|PF17123.1|2.6e+03,zf-RING_11|PF17123.1|2e-08,zf-RING_11|PF17123.1|1.7e+03,zf-rbx1|PF12678.3|8.3e+03,zf-rbx1|PF12678.3|8.6e-08 R_Transcript_86379:285-1076(+)
METPKLTILLLLVMYTSFLVYTSFQHNYSACKLRINKYTSERCSGNFSQEILILEDPNRIRLAKWIQSLDLSRRRPNKVAYMWSLLTKLDHALCNFAGGRCGLESSAELVWTGMLMVLPAHLLISGLVVFVILSIIGSLCLMSVKEHHYVEWTTSDTNILELIGTPSAEQQLVINNGLDQHIIDTYSKVVLNKSNPCRPNYNNNVCWICLMEYQDEEALRSLPGCQHLFHVVCIDQWLRLKAVCPVCRHSLHPATQAQADHKYS

Click here to download the sequence:
Link to NCBI Protein BLAST