Transcript Information: R_Transcript_8642.p1


Annotated TAIR IDAT1G23110.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 59 Blast hits to 59 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8196608-8197665 | Reverse length=248
E-Value9.6E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.179655890644
Replicate 216.864498326344
Replicate 318.123001230691
Condition 2: 8 Hour
Replicate 115.045531473609
Replicate 217.062520280423
Replicate 317.568426343427
Condition 3: 24 Hour
Replicate 119.730806211762
Replicate 216.209286654521
Replicate 316.965168693057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8642.p1 GENE.R_Transcript_8642~~R_Transcript_8642.p1 ORF type:complete len:249 (+),score=48.25 R_Transcript_8642:536-1282(+)
ATGGGTCCCCAGGGTGCATTGAACTCTACTAAAGCACTAGAAGGTGTGGATGGAGTGCAGGTGGTGCAACATGCTCCATTTGCTGTTGAAGAGGTCACTCAACATGGGGACCGGAGGTCAACATGTGAAAGCTCGGAGACTAGAGCCAACCAACAATTTTTACTAATGCAACGGGTACAGCAACAAATATCGTATCGGTTCAGACCTGTCCAGTGTACCCTTACTGGTGATCAACACCTTGCAGAAACAGTTGTTAATGTTATCACCTCCCTCCCATTTATTGCTCTTGGACTGCAGGCACCAAGGAAAAACTTCAACACCAAGTTGTATGCTAATTCTTTGATTGGAGTGGGAGTTGCCTCAAGCTTGTATCATTCTTCAAGAGGTAGAATCCGCAAGTTCTTGAGATGGGCTGATTATACCATGATAGCAACTGCAACTGTGTGCCTTTCCAGAGCCCTCAGGAGTGAGAATTCAAAATATCTTATGGCTGCATCTGCTTTATGTCTACCATTTCAACCGCTGATGGTTTCAGTTCATACTGGTATGATGGAGGTAGCGTTTGCAAAAAGAGCACTGAAAGATCCACAGCTAAGAATGGCCCACAATGTACACAAGGCTTCTTCATTATTAGGGGGCGTGTTATTTGTTGCTGATGATGTTTTCCCACAAACTCCATTCCTTCATGCAGCTTGGCATCTTGCTGCAGCTATTGGCGTTGGCACCTGCAACAAGCTTATTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8642.p1 GENE.R_Transcript_8642~~R_Transcript_8642.p1 ORF type:complete len:249 (+),score=48.25 R_Transcript_8642:536-1282(+)
MGPQGALNSTKALEGVDGVQVVQHAPFAVEEVTQHGDRRSTCESSETRANQQFLLMQRVQQQISYRFRPVQCTLTGDQHLAETVVNVITSLPFIALGLQAPRKNFNTKLYANSLIGVGVASSLYHSSRGRIRKFLRWADYTMIATATVCLSRALRSENSKYLMAASALCLPFQPLMVSVHTGMMEVAFAKRALKDPQLRMAHNVHKASSLLGGVLFVADDVFPQTPFLHAAWHLAAAIGVGTCNKLIE*

Click here to download the sequence:
Link to NCBI Protein BLAST