Transcript Information: R_Transcript_86454.p1


Annotated TAIR IDAT4G09730.1
Annotated Gene NameRH39
Annotated Gene Symbol(s)RH39
Annotation TypeOrtholog
Chromosome Positionchr4:6136333-6139510 | Forward length=621
E-Value2.5E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4784847246738
Replicate 24.0021397664067
Replicate 34.5617969608269
Condition 2: 8 Hour
Replicate 14.4234777358466
Replicate 24.1668215095239
Replicate 35.0349417794814
Condition 3: 24 Hour
Replicate 16.6946664035268
Replicate 25.23930047614
Replicate 37.1298497486479


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86454.p1 GENE.R_Transcript_86454~~R_Transcript_86454.p1 ORF type:complete len:703 (+),score=165.26,DEAD|PF00270.25|7.3e-40,DEAD|PF00270.25|7.3e+03,Helicase_C|PF00271.27|3.9e+03,Helicase_C|PF00271.27|1.3e-24 R_Transcript_86454:131-2110(+)
ATGGGAGGAACAGGAAGAACATTTCTAAGTATCTCTCTTTCCTCCAATCTCATTTCCCACTCCCTTTTCTCATCATCCAGACACTCCTCATTTCTTAAACCCTCATTTCCCACCAGGGTTTTACTAGGGTTTAGACCTTTATGCTCCACAACCACCACCACAACCCCAGCACCTACTAATGTTGAAACAGAGCAAATCCCAAACCCCACAAAGCAATCCATCCTTCTTGAAAGACTCAGACTTAGACACCTCAAAGATGGTGCTAAAACCCCACAAGCAAAACCCCCTCTTGGTTCAAAAAAATCAGGTCAAAGTATGGCTGATGTTGAAAGTGAGGGGAGTTTGAAGAAAAAGGGTGGGGCCCAGAAAGGGGTTTCAAGTTTTAGTGAGTTGGGTTTGAGTGAAGAGGTCATGGGTGCTTTGGAAGAGATGGGTATTTCAGTTCCTACTGAAATTCAGTGTATTGGGATTCCTGTTGTGCTTGATGGCCATAGTGTGGTTTTGGGTTCTCATACTGGGTCTGGCAAGACTTTAGCTTACATGCTACCCATTGTTCAGCTTCTGAGGCGGGATGAAGAATTATTAGGCATTCAAATGAAGCCTAGGCGTCCACGAGCAGTTGTGCTCTGCCCAACAAGGGAACTTTCAGAACAGGTATATCGTGTGGCGAAGTCCATCAGCCATCATGCACGGTTTAGGTCTACCATGGTAAGTGGTGGTGGCCGATTAAGACCCCAAGAAGATTCACTTAATCTCCCAATAGATATGGTGGTTGGCACCCCTGGGAGGATTCTACAACATATTCAAGATGGGAATATTGTCTATGGTGATATCAAGTATTTGGTCTTGGATGAGGCAGACACCATGTTTGATCATGGTTTTGGTCCTGAGATTCGCAATTTTCTTAGCCCACTCAAGAATCGTGCTTCAAAAGCAAATGACTCTGGGTTTCAAACTGTCTTGGTTGCTGCAACGATGACGAAGGCTGTGCAAAAGCTGATTGATGAGGAGTTCCAAGGCATCACACATTTGCGCACTTCAACTTTGCACAAAAAAGTTGCTTCTGCTCGTCATGATTTCATTAGGCTTACAGGTGCTGAAAACAAACTGGAAGCACTGCTACAGGTTCTTGAACCCAGCTTGGCAAAGGGAAACAAGGTGATGGTTTTCTGTAATACTCTGGATTCAAGTCGTGCAGTGGATCACTTCCTTGGGGAAAATCAAATCTACACAGTTAATTACCATGGCGAAGTTCCAGCAGAACAAAGGGTTGAGAATCTCAAAAAGTTTAAGGATGAAGATGGGGATTGCCCAACTCTGGTCTGCACAGATCTGGCTGCTAGGGGACTGGACTTGGATGTGGATCATGTTATCATGTTTGACTTCCCCAAAAATTCTGTTGATTATCTCCATCGCACGGGAAGAACTGCACGTATGGGGGCAAAAGGGAAAGTCACCAGTTTGGTTGCGAAGAGAGATGTGCCTTTAGCTACTCGGATCGAAGAGGCTATCAAGAAAAATGAAAGCATAGAATCTCTTAGTGTAGACAGTGTGAGGAGGGATATTGCAAGGACAAGGATCACTCAACAGAAAGCAATTAATACCAGGGTGATGAAGGCTTCTACTGCCAAAAAGAGTAGTGGAAAGGCTGCTTCAGTGAAGTCATCAAGTGCGTCCGACAAAGTAGTTTCTTCCCAGGCATCTACAAAGAAGACTTCCGGAGGAAAATATGGCAAAGTAAGCGGCCAGTCTCGAGGAAAATCCAGCAAAGTAAGCGGCCAGTCTCAAGGAAAATCCGGCGAAGTAAGCAGCCAGTCTAAAGGAAAATCTGTGAAAGCATTTGGTCCATCCAAATTTGGGAAGAAATCCAGTAAGGGGTCGAAGTCATCAAGCAAAAGTACAACGAAAAAATCTGCAAAGATCAGTGTTGTTGGATTTCGAGGGCGAAGTTCTTCCTCCAGTGACAAAAAGCTAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86454.p1 GENE.R_Transcript_86454~~R_Transcript_86454.p1 ORF type:complete len:703 (+),score=165.26,DEAD|PF00270.25|7.3e-40,DEAD|PF00270.25|7.3e+03,Helicase_C|PF00271.27|3.9e+03,Helicase_C|PF00271.27|1.3e-24 R_Transcript_86454:131-2110(+)
MGGTGRTFLSISLSSNLISHSLFSSSRHSSFLKPSFPTRVLLGFRPLCSTTTTTTPAPTNVETEQIPNPTKQSILLERLRLRHLKDGAKTPQAKPPLGSKKSGQSMADVESEGSLKKKGGAQKGVSSFSELGLSEEVMGALEEMGISVPTEIQCIGIPVVLDGHSVVLGSHTGSGKTLAYMLPIVQLLRRDEELLGIQMKPRRPRAVVLCPTRELSEQVYRVAKSISHHARFRSTMVSGGGRLRPQEDSLNLPIDMVVGTPGRILQHIQDGNIVYGDIKYLVLDEADTMFDHGFGPEIRNFLSPLKNRASKANDSGFQTVLVAATMTKAVQKLIDEEFQGITHLRTSTLHKKVASARHDFIRLTGAENKLEALLQVLEPSLAKGNKVMVFCNTLDSSRAVDHFLGENQIYTVNYHGEVPAEQRVENLKKFKDEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSVDYLHRTGRTARMGAKGKVTSLVAKRDVPLATRIEEAIKKNESIESLSVDSVRRDIARTRITQQKAINTRVMKASTAKKSSGKAASVKSSSASDKVVSSQASTKKTSGGKYGKVSGQSRGKSSKVSGQSQGKSGEVSSQSKGKSVKAFGPSKFGKKSSKGSKSSSKSTTKKSAKISVVGFRGRSSSSSDKKLT*

Click here to download the sequence:
Link to NCBI Protein BLAST