Transcript Information: R_Transcript_86475.p1


Annotated TAIR IDAT1G61520.1
Annotated Gene Namephotosystem I light harvesting complex gene 3
Annotated Gene Symbol(s)LHCA3
Annotation TypeOrtholog
Chromosome Positionchr1:22700152-22701149 | Forward length=273
E-Value2E-183
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.383849225708
Replicate 210.954591521547
Replicate 313.694245302048
Condition 2: 8 Hour
Replicate 19.4927085121566
Replicate 26.4814150264306
Replicate 35.9190034631697
Condition 3: 24 Hour
Replicate 19.8152943944532
Replicate 25.4339043643451
Replicate 36.7407786173416


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86475.p1 GENE.R_Transcript_86475~~R_Transcript_86475.p1 ORF type:complete len:276 (+),score=71.20,Chloroa_b-bind|PF00504.17|1.4e-49 R_Transcript_86475:237-1064(+)
ATGGCAGCACAAGCTTTGGTTTCATCTTCTTTGACTTCTTCAGTGGAGACTGCAAGGCAGATGCTTGGTAGCAGGCCTGGGGTTTCTTCACCTTCTACCTCAAGGAAGAACTCTTTTGTTGTCAGAGCATCTTCTACTCCCCCTGTTAAGCAAGGAGCAGACAGACCCTTGTGCTTTGCATCCAAGCAGAGCCTTTCATACTTGGATGGCAGCCTTCCAGGTGACTACGGATTTGACCCTCTTGGATTGTCAGACCCAGAAGGTACTGGAGGCTTTATCGAGCCCAAGTGGTTGGCTTATGGTGAGATTATCAACGGTCGTTTTGCCATGCTTGGTGCAGCAGGTGCCATTGCACCAGAGATTCTTGGGAAGGCCGGTCTCATCCCCGAAGAAACCGCTCTCCCCTGGTTCAAGACCGGAGTCATCCCCCCAGCTGGTACATACAACTACTGGGCAGACTCTTACACATTGTTTGTCCTAGAGATGGCACTCATGGGGTTTGCAGAGCACAGAAGATTCCAGGACTGGGCTAAGCCTGGCTCAATGGGCAAGCAGTACTTCCTGGGCTTGGAGAAGGGGCTCGGAGGATCAGGTGACCCTGCATACCCAGGAGGGCCATTCTTCAACCCACTTGGCTTCGGAAAGGATGAGAAGTCCATGAAGGATCTGAAGCTCAAGGAAGTGAAGAATGGCAGATTGGCTATGTTGGCTGTCTTGGGTTACTTTATACAGGGTCTTGTAACAGGTGTTGGGCCATACCAGAACCTCCTTGATCACTTGGCTGACCCTGTCAACAACAACATCTTGACCAGCCTTAAGTTCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86475.p1 GENE.R_Transcript_86475~~R_Transcript_86475.p1 ORF type:complete len:276 (+),score=71.20,Chloroa_b-bind|PF00504.17|1.4e-49 R_Transcript_86475:237-1064(+)
MAAQALVSSSLTSSVETARQMLGSRPGVSSPSTSRKNSFVVRASSTPPVKQGADRPLCFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYNYWADSYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAVLGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH*

Click here to download the sequence:
Link to NCBI Protein BLAST