Transcript Information: R_Transcript_86485.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value6E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88162780997747
Replicate 20.33804419274899
Replicate 30.61467095517404
Condition 2: 8 Hour
Replicate 10.35042382750977
Replicate 20.56002208546798
Replicate 30.97414726048588
Condition 3: 24 Hour
Replicate 10.82138845179621
Replicate 20.71018722724578
Replicate 31.3312736303301


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86485.p1 GENE.R_Transcript_86485~~R_Transcript_86485.p1 ORF type:3prime_partial len:559 (+),score=97.36,TPP_enzyme_M_2|PF16582.1|1e-19,TPP_enzyme_C|PF02775.17|2.7e-10 R_Transcript_86485:1655-3328(+)
ATGCAAGTGCAATCTTCTCTAACACATAGTGCTACCATAGGCTTAACAACAGAGGTTGGAAAGATAATTGAGAATGCTATGAACGGGCTTTTAGTAATTGGTGCTATCCACAAAGAAGATGAAATTTGGGCAGCTCTTCTATTAGCCAGACATCTTTCGTGGCCTATTGTTGCAGACATCTTGTCTGGATTACGACTACGAAGGTTAATGACATCTTATCCTGAATATGAAGAAAATTTCATTTTTCTTGATCATTTTGATCATGTGCTCCTCTCTGACATAGTAAGGGAGCGGATGCGAATTGATGTAATCATTCAGGTAGGGAGCAAAATAACGAGCAAGAGGGTTTCCGATTTGCTGGAACAATGTTTTCCATGCTCCTATATCATGGTTGACAAACATCCTTGTAGACATGATCCCTCGCATATAGTGACACACAGGTTCCAGAGCACAATCTGCCAATTTGCTGGATGTCTGCTGAAAGGCACCTTACCACGCAAGAACAGCAAATGGATTAGTTTTCTGAGAGCTTTGAATTCAATGGTTGCATGGGAGTTATCTTTTCAGATCAGCTCTGAGTACGCACTCACTGAACCTCATGTTGCACATGCCCTCTCAGAAGCGCTTGTCTCAGGGACTGCTTTGTTTATTGGAAATAGTATGCCAATCCGTGATGCAGACATGTATGCTCAAGGTGTTGTAAGTGATAGGGGCACAGCACCTCAGTTGAAACTACCATGTCACTGGATAAGTATAGCTGGCAATCGGGGAGCTAGTGGTATTGATGGTTTGCTGAGCACAGCTACTGGTTTTGCTGTAGGATGCAAGAAAAGAGTTCTGTGTGTGATGGGAGATGTTTCCTTTCTTCATGACACAAATGGATTGGCAATCCTCAGCTCAAGGATGTTGCGGAAACCGATGACAGTTGTTGTAATAAACAATAGAGGTGGTGGGATCTTTAGTTTTCTTCCTCTTGCAGAAAAAGCTGAGCCAAAAGTTCTGGAGAAGTACTTTTACTACAATCATGGCATTTCATTAAGCAAGCTGTGTGCAGCACATGGTGTGAAGCATGTGTTAGTGGAAACTAAAGTGGAACTTCAAGAGGCTTTATTAACATCACAAAAGGCAGACACAGATCGTGTTATAGAAGTTACAAGCTCCATCAACAGTAATTCCACATTTCATAGAGTCAACCTAACTGCTCCACCAACTTCAGTTTCAGTCAAAAGTAGACCATCTGATCCACGTAGACAAGGTTTCATATTAGAATTGACGCTTGATGATGGCAGTACTGGGTTTGGCGAGGTTGCGCCCCTTGAAATTCAGGAAGAGAACTTGCAAGATGTGGAGGAGCAATTGCGGTTTCTAGTGCACGCACTAAAAGGAGCTACTGTTACCTCTCTTCTTCCCCTGTTGAGAAATTTCTTTTCTTCTTGGATATGGTGTACCATAGGAGTCCCACCATCTTCTATATTCCCAAGTGTCCGTTGCGGTCTAGAGATGGCCGTTTTGAATGCTATAGCTGCAAAGAAAAAATGTGCATTGAAATTCTTTGGCCACAATTGGGTAAAGGTGAGCTGGTCAATCAGCAACCACCAAGCATTGACATCTGTGCCCTTGTCGATTCTGAAGGAAATCCAGCTGAAGTTGCTGCTGTTGTCTCTGCACTTGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86485.p1 GENE.R_Transcript_86485~~R_Transcript_86485.p1 ORF type:3prime_partial len:559 (+),score=97.36,TPP_enzyme_M_2|PF16582.1|1e-19,TPP_enzyme_C|PF02775.17|2.7e-10 R_Transcript_86485:1655-3328(+)
MQVQSSLTHSATIGLTTEVGKIIENAMNGLLVIGAIHKEDEIWAALLLARHLSWPIVADILSGLRLRRLMTSYPEYEENFIFLDHFDHVLLSDIVRERMRIDVIIQVGSKITSKRVSDLLEQCFPCSYIMVDKHPCRHDPSHIVTHRFQSTICQFAGCLLKGTLPRKNSKWISFLRALNSMVAWELSFQISSEYALTEPHVAHALSEALVSGTALFIGNSMPIRDADMYAQGVVSDRGTAPQLKLPCHWISIAGNRGASGIDGLLSTATGFAVGCKKRVLCVMGDVSFLHDTNGLAILSSRMLRKPMTVVVINNRGGGIFSFLPLAEKAEPKVLEKYFYYNHGISLSKLCAAHGVKHVLVETKVELQEALLTSQKADTDRVIEVTSSINSNSTFHRVNLTAPPTSVSVKSRPSDPRRQGFILELTLDDGSTGFGEVAPLEIQEENLQDVEEQLRFLVHALKGATVTSLLPLLRNFFSSWIWCTIGVPPSSIFPSVRCGLEMAVLNAIAAKKKCALKFFGHNWVKVSWSISNHQALTSVPLSILKEIQLKLLLLSLHLL

Click here to download the sequence:
Link to NCBI Protein BLAST