Transcript Information: R_Transcript_8650.p1


Annotated TAIR IDAT4G13710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7962550-7966012 | Forward length=470
E-Value7.6E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3337572287691
Replicate 26.9208295358844
Replicate 39.8463259600388
Condition 2: 8 Hour
Replicate 16.3259695632081
Replicate 29.2630824553686
Replicate 38.7726046873585
Condition 3: 24 Hour
Replicate 119.532031984372
Replicate 212.673177714407
Replicate 319.157835060024


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8650.p1 GENE.R_Transcript_8650~~R_Transcript_8650.p1 ORF type:complete len:449 (+),score=68.31,Pec_lyase_C|PF00544.15|6.3e-19,Beta_helix|PF13229.2|5e-06 R_Transcript_8650:112-1458(+)
ATGGCGGAAATTCAATCGAAAGTTTTCTCTTTGACGATCACATTGTTGATTTCGATGCTTTTCATTGGGCTCGTTAATGGCAGATTACAGAGAGACGATGAAACCTTGAAATTGAGGATTGATGAGCAGGTTAAAAGCTTGAAGAACTCATCAATGGCGGACAGGGTGAACCAAGCTGAATTGAGAAACGAACAAGCTGCAATGGAGCGGCCAGAAAAAGTTGTCTCTATGGTTGAAAGGAGCATTAGCAACAGCACAGCAAGAAGAAACCTAGGCTATTTCTCATGTGGGACAGGCAACCCAATCGACGACTGCTGGAGGTGTGATCCTAACTGGCATAAAAACCGTAAGCGCCTTGCTGACTGTGCCATTGGCTTTGGTCGAAACGCTGTTGGTGGACGTGATGGACGGTTCTATGTGGTTACTGACCCTAGTGATGATGACGCGGTGAACCCCAAGCCTGGGACACTCCGCCATGCTGTCATCCAGGATGAGCCACTTTGGATCATCTTCAAGAGAGACATGGTGATCACCCTCAAGGAGGAGCTGATCATGAACAGCTTTAAGACCATTGATGGCAGAGGAGTGAATGTCCACATTGCCAATGGGGCTTGCGTTACTATCCAGTATATCACAAATGTGATCATTCATGGTATTCACATCCATGACTGTAAGCCAACTGGCAATGCCATGGTCAGAAGCTCCCCTTCTCATTATGGGTGGAGGACTATAGCTGATGGTGATGGGATTTCCATCTTTGGTGCAAGCCACATTTGGATTGACCACAATTCTCTCGCTAATTGTGCCGATGGGCTCATTGATGCTATCATGGCCTCCACAGCCATTACCATTTCTAACAACTACTTCACTCACCATAATGAGGTGATGTTGCTCGGTCACAGCGACTCATACACAAAGGATAAGATAATGCAAGTAACCATTGCCTACAACCACTTTGGAGAGGGTCTGATTCAGAGGATGCCAAGGTGTAGGCATGGGTACTTCCATGTTGTGAACAATGACTACACCCACTGGGAAATGTATGCTATTGGAGGCAGTGCAGAGCCCACCATTAACAGCCAGGGGAATAGATATCTCGCCCCTGGTGATCGTTTTGCCAAAGAGGTGACTAAGAGGGTGGACACAGATGAGGGTCAGTGGAAGCACTGGAACTGGAGATCAGAAGGTGACCTGCTACTAAACGGGGCCTTCTTTACCCCATCAGGGGCCGGATCCAGTTCTAGCTACGCCAGAGCCTCCAGCTTAGCGGCCAAGCCATCCAACCTGGTTGGGACCTTGACTTCTGGCGCAGGTGTTCTTAATTGTCGTCGTGGCAATGCATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8650.p1 GENE.R_Transcript_8650~~R_Transcript_8650.p1 ORF type:complete len:449 (+),score=68.31,Pec_lyase_C|PF00544.15|6.3e-19,Beta_helix|PF13229.2|5e-06 R_Transcript_8650:112-1458(+)
MAEIQSKVFSLTITLLISMLFIGLVNGRLQRDDETLKLRIDEQVKSLKNSSMADRVNQAELRNEQAAMERPEKVVSMVERSISNSTARRNLGYFSCGTGNPIDDCWRCDPNWHKNRKRLADCAIGFGRNAVGGRDGRFYVVTDPSDDDAVNPKPGTLRHAVIQDEPLWIIFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACVTIQYITNVIIHGIHIHDCKPTGNAMVRSSPSHYGWRTIADGDGISIFGASHIWIDHNSLANCADGLIDAIMASTAITISNNYFTHHNEVMLLGHSDSYTKDKIMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPGDRFAKEVTKRVDTDEGQWKHWNWRSEGDLLLNGAFFTPSGAGSSSSYARASSLAAKPSNLVGTLTSGAGVLNCRRGNAC*

Click here to download the sequence:
Link to NCBI Protein BLAST