Transcript Information: R_Transcript_8654.p1


Annotated TAIR IDAT4G13710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7962550-7966012 | Forward length=470
E-Value3.8E-199
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8448914770349
Replicate 25.6928744568971
Replicate 37.5465345433388
Condition 2: 8 Hour
Replicate 15.3540521021673
Replicate 25.1501739517599
Replicate 35.5036953484555
Condition 3: 24 Hour
Replicate 110.441451683737
Replicate 26.4944056791496
Replicate 312.188197070546


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8654.p1 GENE.R_Transcript_8654~~R_Transcript_8654.p1 ORF type:3prime_partial len:343 (+),score=61.62,Pec_lyase_C|PF00544.15|1.1e-17,Beta_helix|PF13229.2|2e+03,Beta_helix|PF13229.2|1.3e-07 R_Transcript_8654:100-1125(+)
ATGACGATAATGTCTTCTACTAAGACATCATGGATTGCTTCTCTGTCTTCTGTTTTAGTTCTTCTTCTCCTTTTTGCTGCTCTTGTTGCTTCAAGGTCAGTACAAAAAACAGAGAACTCAAAGAGCTCAAATTCCACAACAATGGCGATCCAGCAGGTGAAGGTGGAAGCCATAAATGAACATGGCCATGCTGTGGATGACCCTGAAGAGGTTGTTTCAATGGTTCACATGAGTATCCGGAACAGTACTGAGAGGAGGAAGCTGGGTTACTTCTCATGTGGGACGGGGAACCCCATTGATGACTGCTGGCGTTGTGACAACGACTGGCACAAAAACCGCAAGCGCCTGGCTGACTGTGGTATTGGTTTCGGAAGAAATGCCATTGGTGGCCGGAATGGCCGTTTCTATGTTGTCACAGACCCTAATGATGATGACCCTGTCAATCCTAAGCCTGGAACCCTCCGTCATGCGGTCATCCAGGAGGAACCTCTTTGGATTGTGTTCGAACGTGACATGGTGATCCGGTTGAAGGAGGAGCTCATAATGAACAGCTTCAAGACAATCGATGGTCGTGGAAGCAACATCCACATAGCTAATGGGGCTTGCATCACAATTCAATATGTGACGAATATTATTATTCATGGCATCCACATTCATGATTGCAAACCCACTGGCAATGCTATGGTCAGGAGCAGCCCTTCTCATTATGGATGGAGGACCATGGCTGATGGAGATGGCATCTCGATCTTTGGAGGGAGTCATATTTGGATTGATCACAATTCACTCTCCCACTGTGCTGATGGCCTCGTCGATGCTATCATGGGGTCAACCGCCATTACTATTTCCAACAATCACTTTGCCCACCATAATGAGGTGATGTTGTTGGGACACAGTGACTCTTATGTAAAAGACAAGCAAATGCAAGTTACTATTGCTTTCAACCACTTTGGTGCAGGCCTCATCCAGAGAATGCCAAGGTGTCGACATGGTTATTTCCACGTCGTGAACAATGACTACACCCACTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8654.p1 GENE.R_Transcript_8654~~R_Transcript_8654.p1 ORF type:3prime_partial len:343 (+),score=61.62,Pec_lyase_C|PF00544.15|1.1e-17,Beta_helix|PF13229.2|2e+03,Beta_helix|PF13229.2|1.3e-07 R_Transcript_8654:100-1125(+)
MTIMSSTKTSWIASLSSVLVLLLLFAALVASRSVQKTENSKSSNSTTMAIQQVKVEAINEHGHAVDDPEEVVSMVHMSIRNSTERRKLGYFSCGTGNPIDDCWRCDNDWHKNRKRLADCGIGFGRNAIGGRNGRFYVVTDPNDDDPVNPKPGTLRHAVIQEEPLWIVFERDMVIRLKEELIMNSFKTIDGRGSNIHIANGACITIQYVTNIIIHGIHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGGSHIWIDHNSLSHCADGLVDAIMGSTAITISNNHFAHHNEVMLLGHSDSYVKDKQMQVTIAFNHFGAGLIQRMPRCRHGYFHVVNNDYTHW

Click here to download the sequence:
Link to NCBI Protein BLAST