Transcript Information: R_Transcript_86558.p1


Annotated TAIR IDAT4G27020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13568604-13571381 | Reverse length=523
E-Value9.7E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96474423650733
Replicate 20.3995067732488
Replicate 31.6465731041632
Condition 2: 8 Hour
Replicate 12.2777548788135
Replicate 22.3637295815207
Replicate 31.1128894460702
Condition 3: 24 Hour
Replicate 11.9414636133365
Replicate 24.6162169770976
Replicate 31.4807749471051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86558.p1 GENE.R_Transcript_86558~~R_Transcript_86558.p1 ORF type:5prime_partial len:473 (+),score=80.65 R_Transcript_86558:2-1420(+)
GTATGTTTGAAAACCCCATTTCATCCCATAGATATTTTACCCCTTTTACCAAGACAAGTGTCGTGGCCAATCCTAAACTCTTTGAATAGCGCTGTTGATCTTCTTCCAACCTTTGTTGGTGATGCTTCTTCTAATAATAACACCACCTTGGAATGGAAAGGTGCTTGCTTTTATGACAACACTGCTTGGATGGAATTTCATAACAAAACCGGCAGTGAATTTGGAGGTGGCACCCTTCACATAAAGGTTAACAAAGCTCATAGCTGGACTTGTATGGACATCTATGTCTTTGCGACTCCATATCGTGTGACATGGGACTACTATTTTCTATCTCGGGAACATACATTGGATTTCAAGGAGTGGGAAGGGAAAGCGGAGTATGAATATGTGAAACATCATGGGGTTTCTATTTTCCTTATGCAAGCAGGAATGCTGGGGACTCTACAAGCATTGTGGGAGGTCTTTCCTCTATTTACAAATACCATCTGGGGTGAGAACGCTAACCTGCGATTCCTGAAGAAGCATATGGGAGCCTCCTTTGAGGTTCGTCCACAACCCTGGGTGACTAACATTACTTCTGATGAGATCCACTCGGGAGACTTTCTTGCTATATCCAAAATTCGTGGACGGTGGGGTGGGTTTGAGACCCTGGAGAAGTGGGTCAGCGGATCCTATGCTGGTCATACAGCTTTGTGTTTGAGGGATTCTGATGGAAAGCTGTGGGTGGCGGAATCTGGACATGAAAATGAGGAGGGAGAAGATATTATTGCTCTGATTCCCTGGGATGAATGTGCTGCATGGGAGTATGCAAAAAGTATGGATGGAAAGCAATATGGCTATCATAACATGATATTCAGCTGGATAGATACTGTTGCTAAGAACTATCCTCCCCCATTGGACGCGCATCTGGTTGCTTCTGTTATGACGATATGGAATCACATGCAGCCTGAATATGCAGCGAACTTGTGGAAGGAAGCACTGAACAAACGACTGGGAACTGAGGATCTTGACCTCCCTGAAGTTCTAGTAGAAGTTGAAAGACGTGGATCATCCTTTGACGAGTTACTGACCATTCCTGAAGAAGATGATTGGATTTACGAAGATGGACAGTCTGTATCATGTGTTGCGTATGTCCTTGGAATATACAAGGCAGGTGGGCTCTTTGATCCAATTTCTAGCTCCATACAGGCAACAGAGTTCACTATAAAGGATGCATATACACTAAAATTCTTTGAAGACGATTTGAGCCGTCTGCCAAGTTGGTGCAATGATGCGGATGATGTGAAGCTTCCTTATTGTCAAATTCGAGGGAAGTATAGAATGGAACTACCAGAGTATAATACCATTGTTCCATACCCCCATATGAATGAAAAATGTCCATCACTTCCTCCAAAATACTACAGACCGAGCACTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86558.p1 GENE.R_Transcript_86558~~R_Transcript_86558.p1 ORF type:5prime_partial len:473 (+),score=80.65 R_Transcript_86558:2-1420(+)
VCLKTPFHPIDILPLLPRQVSWPILNSLNSAVDLLPTFVGDASSNNNTTLEWKGACFYDNTAWMEFHNKTGSEFGGGTLHIKVNKAHSWTCMDIYVFATPYRVTWDYYFLSREHTLDFKEWEGKAEYEYVKHHGVSIFLMQAGMLGTLQALWEVFPLFTNTIWGENANLRFLKKHMGASFEVRPQPWVTNITSDEIHSGDFLAISKIRGRWGGFETLEKWVSGSYAGHTALCLRDSDGKLWVAESGHENEEGEDIIALIPWDECAAWEYAKSMDGKQYGYHNMIFSWIDTVAKNYPPPLDAHLVASVMTIWNHMQPEYAANLWKEALNKRLGTEDLDLPEVLVEVERRGSSFDELLTIPEEDDWIYEDGQSVSCVAYVLGIYKAGGLFDPISSSIQATEFTIKDAYTLKFFEDDLSRLPSWCNDADDVKLPYCQIRGKYRMELPEYNTIVPYPHMNEKCPSLPPKYYRPSTC*

Click here to download the sequence:
Link to NCBI Protein BLAST