Transcript Information: R_Transcript_86572.p1


Annotated TAIR IDAT2G47350.1
Annotated Gene NameHIT zinc finger ;PAPA-1-like conserved region
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19434588-19437045 | Forward length=486
E-Value2.4E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.303617025792
Replicate 28.0975493073095
Replicate 311.101558834995
Condition 2: 8 Hour
Replicate 110.153694850137
Replicate 211.676501439254
Replicate 313.226514905982
Condition 3: 24 Hour
Replicate 114.182126649196
Replicate 210.914718563596
Replicate 311.728224013116


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86572.p1 GENE.R_Transcript_86572~~R_Transcript_86572.p1 ORF type:complete len:586 (+),score=167.29,PAPA-1|PF04795.8|1.5e+04,PAPA-1|PF04795.8|5.5e+03,PAPA-1|PF04795.8|1.6e+04,PAPA-1|PF04795.8|8.8e-20,zf-HIT|PF04438.12|5.8e-08 R_Transcript_86572:423-2180(+)
ATGGATGATTTTGGCTCTTCTCGTTTCGAAGTCATTGGGAACACTATCAGAAAGAGACGGAGCCATACCTCCCGTAGGCCTCGGCCTGAGTCTCAACCAGTTTCTGATGGCCGTGATGTTTCATCCTTGTCCTCTACCCCTCCGTCAGATGATGTGAGGGCTGGCTCTAGTGATGAGAACAGTGTTGCTGACCAAAGTTCTAGGAGGAAAGAGCTCAGTCTTAGTCAATGCGCCTCAAGATTTCCTGCAGCCAGTGGACCAGATGGAGAGAAATCTAGTAGGAAGAGTAAGAAAGTAGATGTTGGACTCGACGAATTATATGTTACTGGTGGTAGTAGGGATGGGAGTGAGCTGGGACGAACTGGAACATCAAATCAGAAAAGGAGCAGTGAAGGGGTACTTGCTCCTGCTAATTGGAAAAATACAAGCAAGGTAAACGAAATCTTGGAACCTCAGAAGACTATGGCATTGAATAATACAAAGAGTGGTGACGGCTCAGGCCCACCTTTGGATGGATTGGGGAGTGAAAATAAAGTCAAGAAAGTGAAGCTTAAGGTTGGTGGTGTCACGCGTACTATTGATGCCGATTCTTCTGCCAAGACTTCCCGTGTTTCAGATGCCTCTCTCCCGCGGCAGAAGGTGGTACATAAGGATAAATCAGATGATGATAGCTCGCCCCCAACAGATAAAAGGCGTGGTTTACAGGGAATTCCTTGGAAGGATTTCTCCAGAGCAGGGTTTAGTCTTGGAAGGGAGGAATCCTCAATGGGGAGGGGGAATGCGAAGAATAACTCTGGGAAGCAAGGGGACAAGAGTGACCCTGTGCGGAAGAGCAAGCGGGCGCCTAAGAAGCGTGCAGTTGACGGCTTTGATGATGACGACGATGACGAGATCAGGTACTTAGAGAAATTGAAGAATGCCAAATTTTCTACTGGATCTAGAGATGATGATGAAGAATCTGGTAGAAAGCACCGAAGATTGTCTAAATTTTCAGGGGATAGCCCACAAAATGTCGAGGGCAATGGATCTTCTAGATCGATTAAAGATGGTAAGAAGAAATCACCATCGGAGGATACTGACTATGAAGAAGAGGAGGATCCTTTATCTGATGGTGAACCTGAGAGTAGAAAGAAAAAGAAATCAAGGAAGGATCCTGACTCACCAGTTGAGACCAAGCGGGAAATGACTCTTACAACTCGCCAAAGAGCACTTCAATCAGGCAGAGACACCTCTGCCTCTGGTGCAAATGGGATTGAATTTCCAAATGGATTACCTCCTGCACCATCTAGAAAGCAAAAGGAACAGCTGTCAGAAGTGGAGCAACAATTGAAGAAAGCAGAGGCTGCTCAGAGACGTAGAATGCAAAATGAGAAAGCGGCTAGGGAATCTGAGGCTGAGGCCATTAGAAAAATACTTGGCCAAGACTCAAGCAGGAAAAAGCGTGAAGAGAAAAAGAAGAAACGTGAGGAAGAGCTGGCCCAGGAGAAGGCTGCTGATGAATTGATGCGTGCGTCAAATAGTATCAGAGTAATCATGGGTCCTAATGGGACGACTGTTACCTTTCCGAATGAGATGGGTTTTCCTAGTATATTTGACTCAAAACCTATCAGTTATCCTCCTCCACGCGAAACGTGTGCTGGTCCATCATGTACAAATCCATACAAGTATCGGGACTCAAAGACAAAGCTGCCTTTATGCAGCCTCGAGTGCTACAAGGCTGTTCAGGGGAACAAGCAGAATGAAGCGGCTTCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86572.p1 GENE.R_Transcript_86572~~R_Transcript_86572.p1 ORF type:complete len:586 (+),score=167.29,PAPA-1|PF04795.8|1.5e+04,PAPA-1|PF04795.8|5.5e+03,PAPA-1|PF04795.8|1.6e+04,PAPA-1|PF04795.8|8.8e-20,zf-HIT|PF04438.12|5.8e-08 R_Transcript_86572:423-2180(+)
MDDFGSSRFEVIGNTIRKRRSHTSRRPRPESQPVSDGRDVSSLSSTPPSDDVRAGSSDENSVADQSSRRKELSLSQCASRFPAASGPDGEKSSRKSKKVDVGLDELYVTGGSRDGSELGRTGTSNQKRSSEGVLAPANWKNTSKVNEILEPQKTMALNNTKSGDGSGPPLDGLGSENKVKKVKLKVGGVTRTIDADSSAKTSRVSDASLPRQKVVHKDKSDDDSSPPTDKRRGLQGIPWKDFSRAGFSLGREESSMGRGNAKNNSGKQGDKSDPVRKSKRAPKKRAVDGFDDDDDDEIRYLEKLKNAKFSTGSRDDDEESGRKHRRLSKFSGDSPQNVEGNGSSRSIKDGKKKSPSEDTDYEEEEDPLSDGEPESRKKKKSRKDPDSPVETKREMTLTTRQRALQSGRDTSASGANGIEFPNGLPPAPSRKQKEQLSEVEQQLKKAEAAQRRRMQNEKAARESEAEAIRKILGQDSSRKKREEKKKKREEELAQEKAADELMRASNSIRVIMGPNGTTVTFPNEMGFPSIFDSKPISYPPPRETCAGPSCTNPYKYRDSKTKLPLCSLECYKAVQGNKQNEAASC*

Click here to download the sequence:
Link to NCBI Protein BLAST