Transcript Information: R_Transcript_86579.p1


Annotated TAIR IDAT5G47180.1
Annotated Gene NamePlant VAMP (vesicle-associated membrane protein) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19161384-19163265 | Reverse length=220
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2681052978696
Replicate 23.4471537996907
Replicate 34.1026992709527
Condition 2: 8 Hour
Replicate 15.2382696155798
Replicate 23.7824377243796
Replicate 33.1607282174803
Condition 3: 24 Hour
Replicate 13.5407563386011
Replicate 24.4988339030531
Replicate 34.2468680735771


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86579.p1 GENE.R_Transcript_86579~~R_Transcript_86579.p1 ORF type:complete len:201 (+),score=30.16 R_Transcript_86579:214-816(+)
ATGATTACAAATCTCCTTCACATCCAACCTTCTGAACTCAAATTCCCTTTTCATGTAAACAAGCTGAGTACATGTTGGTTACAAATAACTAACAGAACTGATCATAATGTGGCTTTCAAGTTCAGAAAAGAAAGAGGCAATGGTCTCGAGGAGCAGAAGTTGAGGGTTGTTTATGTCACCGCTAATCCCCCATCTCCTATACCCGAAGGATCAGAAGAAGAGTGTTCCCCTCAAGCATCTGAGCTCGAAAATGCTGAGCTCAGAAATCGTCTAATCAACTTTTTTGATTCCGCATTGGTGAATACAAGCGAATGCCAAGATCAGTTTTCAGAGGAAACCAAAACAGAAAACGACAATGAGGACCAAGTATCCCGGGAATCAGAATCTGCATCAAAACCTGAAGGGCAACCTAACAAGGACTGGGATACAGTTTCGAAGTTGATTGAGGAGCTAACCTTAGTAATTCTACAAAACCAAGATCTGCGACATGAATTGGAGATCAAAAGGAAACGAGCCAAGAGGATATGGAGTTCCAACTCCTCAATTTTAGTTGCCCTTTTAGCCTGTTTTGTGGGGCTTGTAGTCGGGTATGTGATAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86579.p1 GENE.R_Transcript_86579~~R_Transcript_86579.p1 ORF type:complete len:201 (+),score=30.16 R_Transcript_86579:214-816(+)
MITNLLHIQPSELKFPFHVNKLSTCWLQITNRTDHNVAFKFRKERGNGLEEQKLRVVYVTANPPSPIPEGSEEECSPQASELENAELRNRLINFFDSALVNTSECQDQFSEETKTENDNEDQVSRESESASKPEGQPNKDWDTVSKLIEELTLVILQNQDLRHELEIKRKRAKRIWSSNSSILVALLACFVGLVVGYVIK*

Click here to download the sequence:
Link to NCBI Protein BLAST