Transcript Information: R_Transcript_86580.p1


Annotated TAIR IDAT4G00170.1
Annotated Gene NamePlant VAMP (vesicle-associated membrane protein) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:70732-72085 | Reverse length=239
E-Value6E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4181574821571
Replicate 24.0105292930007
Replicate 34.2038582105298
Condition 2: 8 Hour
Replicate 11.2839030309417
Replicate 23.4336934662495
Replicate 32.4474081735353
Condition 3: 24 Hour
Replicate 13.9552776497168
Replicate 21.4042674199993
Replicate 31.6395284409661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86580.p1 GENE.R_Transcript_86580~~R_Transcript_86580.p1 ORF type:complete len:267 (+),score=42.35,Motile_Sperm|PF00635.22|3.3e-25,Motile_Sperm|PF00635.22|1.5e+03 R_Transcript_86580:215-1015(+)
ATGATTACAAATCTTCTTCACATCCAACCTTCTGAACTCAAATTCCCTTTTCATGTAAACAAGCTGAGTACATGTTGGTTACAAATAACTAACAGAACTGATCATAATGTGGCTTTCAAGGTCAAAACAACCCATCCCAAAAAATATTGTGTCCGTCCTAATGTTGGCATTGTCTCTCCTGGCTGTACCTGTGTTATTAGAGTTGGTATGCAAGCTCAGAAAGATGTGATTCAACCTACTGTGTTAAAAGACAAGTTCCTAATCCAAAGTGTGATTGCACCAGTTGGGTTGAATCTTGATGACATAACCTCTGAACTGTTCAGAAAAGAAAGAGGCAATGGTCTCGAGGAGCAGAAGTTGAGGGTTGTTTATGTCACCGCTAATCCCCCATCTCCTATACCCGAAGGATCAGAAGAAGAGTGTTCCCCTCAAGCATCTGAGCTCGAAAATGCTGAGCTCAGAAATCGTCTAATCAACTTTTTTGATTCCGCATTGGTGAATACAAGCGAATGCCAAGATCAGTTTTCAGAGGAAACCAAAACAGAAAACGACAATGAGGACCAAGTATCCCGGGAATCAGAATCTGCATCAAAACCTGAAGGGCAACCTAACAAGGACTGGGATACAGTTTCGAAGTTGATTGAGGAGCTAACCTTAGTAATTCTACAAAACCAAGATCTGCGACATGAATTGGAGATCAAAAGGAAACGAGCCAAGAGGATATGGAGTTCCAACTCCTCAATTTTAGTTGCCCTTTTAGCCTGTTTTGTGGGGCTTGTAGTCGGGTATGTGATAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86580.p1 GENE.R_Transcript_86580~~R_Transcript_86580.p1 ORF type:complete len:267 (+),score=42.35,Motile_Sperm|PF00635.22|3.3e-25,Motile_Sperm|PF00635.22|1.5e+03 R_Transcript_86580:215-1015(+)
MITNLLHIQPSELKFPFHVNKLSTCWLQITNRTDHNVAFKVKTTHPKKYCVRPNVGIVSPGCTCVIRVGMQAQKDVIQPTVLKDKFLIQSVIAPVGLNLDDITSELFRKERGNGLEEQKLRVVYVTANPPSPIPEGSEEECSPQASELENAELRNRLINFFDSALVNTSECQDQFSEETKTENDNEDQVSRESESASKPEGQPNKDWDTVSKLIEELTLVILQNQDLRHELEIKRKRAKRIWSSNSSILVALLACFVGLVVGYVIK*

Click here to download the sequence:
Link to NCBI Protein BLAST