Transcript Information: R_Transcript_86710.p1


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84244435175625
Replicate 20.32302000640459
Replicate 30.52861702144967
Condition 2: 8 Hour
Replicate 10.376705614573
Replicate 20.68802713357494
Replicate 30.13962777400298
Condition 3: 24 Hour
Replicate 10.88299258568093
Replicate 20.50896751285948
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86710.p1 GENE.R_Transcript_86710~~R_Transcript_86710.p1 ORF type:5prime_partial len:130 (+),score=36.95,RNase_H2_suC|PF08615.7|5.7e-06 R_Transcript_86710:3-392(+)
GCTCAACATCTTGAAAAGGAGGCAAGTTGGTGGCAAATCACTGGTCTAACATGCAAACGGCCTACCATAAATTCAACCTTCAAGAGACCATCTGCAGGTTTTAATGGTTTTATTCTGGGAAAGAAGGACCTTAGTAAGGATAAAGCTAGGAAAACTGCTGGTAGAAATAAACGTCCTGAAATTTCCAGTGGTAATGAAAATAGTTGGGATATGCTGGCCAAATGTGGGAAATTGACATTCTGGAACCATGATAGTCAACCTTCTCAAGATGATGCCTCTTTGCTCTTGTTTCACTGGTTTGCTGTTGCCAAGGCGCTGCACAAGCCACTGAGTGCTGAAGATTTGAGCTCTGCATCTGCTACTGAAAACCAGATCTCAGAACAAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86710.p1 GENE.R_Transcript_86710~~R_Transcript_86710.p1 ORF type:5prime_partial len:130 (+),score=36.95,RNase_H2_suC|PF08615.7|5.7e-06 R_Transcript_86710:3-392(+)
AQHLEKEASWWQITGLTCKRPTINSTFKRPSAGFNGFILGKKDLSKDKARKTAGRNKRPEISSGNENSWDMLAKCGKLTFWNHDSQPSQDDASLLLFHWFAVAKALHKPLSAEDLSSASATENQISEQR*

Click here to download the sequence:
Link to NCBI Protein BLAST