Transcript Information: R_Transcript_86712.p1


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.93496888147561
Condition 2: 8 Hour
Replicate 10
Replicate 20.45634452737113
Replicate 30.55566154960368
Condition 3: 24 Hour
Replicate 10
Replicate 20.67516098644624
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86712.p1 GENE.R_Transcript_86712~~R_Transcript_86712.p1 ORF type:complete len:98 (+),score=16.24,RNase_H2_suC|PF08615.7|1.8e-11 R_Transcript_86712:283-576(+)
ATGGAGGAAAGAAATGGTAGAACGATAGGCTGCACAGGAACAATAAATTTCTGTCAATCTCCAAGCTCAGCAGAAGAAGGTGCTGTGGATTTAACTGGACATGTCCACCGCCTTCCTTGTTGCGTCAAATTCAATGGGTCATCCAATGTCTCCCACTATTTTAAGCCCAAATCTACTGGTATTAAGGTGGATGGCTTAGCAGTAGAGGAAGCTTTCTTTAGGGGTAGGAAATTGGAGGGCGTTACAGTTCCATTGCCCGAGGGTTATTCTGCTGCACGAGCCACTGAGTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86712.p1 GENE.R_Transcript_86712~~R_Transcript_86712.p1 ORF type:complete len:98 (+),score=16.24,RNase_H2_suC|PF08615.7|1.8e-11 R_Transcript_86712:283-576(+)
MEERNGRTIGCTGTINFCQSPSSAEEGAVDLTGHVHRLPCCVKFNGSSNVSHYFKPKSTGIKVDGLAVEEAFFRGRKLEGVTVPLPEGYSAARATEC*

Click here to download the sequence:
Link to NCBI Protein BLAST