Transcript Information: R_Transcript_86714.p1


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7656001446544
Replicate 23.0221947568914
Replicate 34.6854690537584
Condition 2: 8 Hour
Replicate 12.596985676223
Replicate 23.3880124001796
Replicate 35.0879514617751
Condition 3: 24 Hour
Replicate 14.6959151147577
Replicate 24.3442176602652
Replicate 37.1300856177014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86714.p1 GENE.R_Transcript_86714~~R_Transcript_86714.p1 ORF type:5prime_partial len:132 (+),score=27.34,RNase_H2_suC|PF08615.7|2.1e-06 R_Transcript_86714:3-398(+)
GCTCAACATCTTGAAAAGGAGGCAAGTTGGTGGCAAATCACTGGTCTAACATGCAAACGGCCTACCATAAATTCAACCTTCAAGAGACCATCTGCAGGTTTTAATGGTTTTATTCTGGGAAAGAAGGACCTTAGTAAGGATAAAGCTAGGAAAACTGTTGGTAGAAATACACGTCCTGAAACATCCAGTGGTAATGAAAATAGTTGGGATATCTCTCTCAAAAAAAAAGAAAATAGTTGGGATATGCTGGCCAAATGTGGGAAATTGACATTTTGGAACCATGATAGTCAATCTTCTCAAGATGATGCCTCTGTGCGCTTGTTTCACTGGTTTGCTGTTGCCAAGGTGGTAAGTTTATTGTCCCGCATCTTGATGCGGGAGCATTTTCAAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86714.p1 GENE.R_Transcript_86714~~R_Transcript_86714.p1 ORF type:5prime_partial len:132 (+),score=27.34,RNase_H2_suC|PF08615.7|2.1e-06 R_Transcript_86714:3-398(+)
AQHLEKEASWWQITGLTCKRPTINSTFKRPSAGFNGFILGKKDLSKDKARKTVGRNTRPETSSGNENSWDISLKKKENSWDMLAKCGKLTFWNHDSQSSQDDASVRLFHWFAVAKVVSLLSRILMREHFQV*

Click here to download the sequence:
Link to NCBI Protein BLAST