Transcript Information: R_Transcript_86716.p3


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9517849703725
Replicate 27.4838298513538
Replicate 35.6699845535031
Condition 2: 8 Hour
Replicate 18.4852007242929
Replicate 25.9776614822971
Replicate 39.1656647687103
Condition 3: 24 Hour
Replicate 18.8648958602026
Replicate 211.136813895242
Replicate 310.618787422356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86716.p3 GENE.R_Transcript_86716~~R_Transcript_86716.p3 ORF type:complete len:101 (+),score=15.54 R_Transcript_86716:106-408(+)
ATGGTTTTATTCTGGGAAAGAAGGACCTTAGTAAGGATAAAGCTAGGAAAACTGTTGGTAGAAATACACGTCCTGAAACATCCAGTGGTAATGAAAATAGTTGGGATATCTCTCTCAAAAAAAAAAGAAAATAGTTGGGATATGCTGGCCAAATGTGGGAAATTGACATTTTGGAACCATGATAGTCAATCTTCTCAAGATGATGCCTCTGTGCGCTTGTTTCACTGGTTTGCTGTTGCCAAGGTGCCATGTAATCACGTGCATGGGGATGGCAAGCCACGAAAATGGGTGGAAATGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86716.p3 GENE.R_Transcript_86716~~R_Transcript_86716.p3 ORF type:complete len:101 (+),score=15.54 R_Transcript_86716:106-408(+)
MVLFWERRTLVRIKLGKLLVEIHVLKHPVVMKIVGISLSKKKENSWDMLAKCGKLTFWNHDSQSSQDDASVRLFHWFAVAKVPCNHVHGDGKPRKWVEME*

Click here to download the sequence:
Link to NCBI Protein BLAST