Transcript Information: R_Transcript_86717.p1


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value9.6E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.647619569956
Replicate 218.95341713255
Replicate 315.353705199583
Condition 2: 8 Hour
Replicate 115.61801115554
Replicate 217.526096578227
Replicate 313.736353982995
Condition 3: 24 Hour
Replicate 117.993957016309
Replicate 224.201175971823
Replicate 324.727190700333


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86717.p1 GENE.R_Transcript_86717~~R_Transcript_86717.p1 ORF type:complete len:185 (+),score=40.66,RNase_H2_suC|PF08615.7|5.4e-23 R_Transcript_86717:283-837(+)
ATGGAGGAAAGAAATGGTAGAACGATAGGCTGCACAGGAACAATAAATTTCTGTCAATCTCCAAGCTCAGCAGAAGAAGGTGCTGTGGATTTAACTGGACATGTCCACCGCCTTCCTTGTTGCGTCAAATTCAATGGGTCATCCAATGTCTCCCACTATTTTAAGCCCAAATCTACTGGTATTAAGGTGGATGGCTTAGCAGTAGAGGAAGCTTTCTTTAGGGGTAGGAAATTGGAGGGCGTTACAGTTCCATTGCCCGAGGGTTATTCTGGTTTTATTCTGGGAAAGAAGGACCTTAGTAAGGATAACGCTAGAAAAAATGCTGCTAGAAATAAAGATCCTAAAATATCCAGTGGTAATGAAAATAGTTGGGATATGCTGGCCAAATGTGGGAAATTGACATTCTGGAACCATGATAGTCAACCTTCTCAAGATGATGCCTCTTTGCGCTTGTTTCACTGGCTTGCTGTTGCCAAGGCGCTGCACGAGCCACTGAGTGCTGAAGATTTGAGCTCTGCATCTGCTACTGAAAACCAGATCTCAGAACAAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86717.p1 GENE.R_Transcript_86717~~R_Transcript_86717.p1 ORF type:complete len:185 (+),score=40.66,RNase_H2_suC|PF08615.7|5.4e-23 R_Transcript_86717:283-837(+)
MEERNGRTIGCTGTINFCQSPSSAEEGAVDLTGHVHRLPCCVKFNGSSNVSHYFKPKSTGIKVDGLAVEEAFFRGRKLEGVTVPLPEGYSGFILGKKDLSKDNARKNAARNKDPKISSGNENSWDMLAKCGKLTFWNHDSQPSQDDASLRLFHWLAVAKALHEPLSAEDLSSASATENQISEQR*

Click here to download the sequence:
Link to NCBI Protein BLAST