Transcript Information: R_Transcript_86735.p1


Annotated TAIR IDAT5G02880.1
Annotated Gene Nameubiquitin-protein ligase 4
Annotated Gene Symbol(s)UPL4
Annotation TypeOrtholog
Chromosome Positionchr5:662643-668847 | Forward length=1502
E-Value3.9E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8831987078942
Replicate 26.9372198611638
Replicate 39.0072975723564
Condition 2: 8 Hour
Replicate 16.8904946585213
Replicate 29.5651762147283
Replicate 310.364204807746
Condition 3: 24 Hour
Replicate 17.0373177934168
Replicate 26.4697273253138
Replicate 36.8192848773248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86735.p1 GENE.R_Transcript_86735~~R_Transcript_86735.p1 ORF type:complete len:1592 (+),score=321.51,HECT|PF00632.21|5.6e-81 R_Transcript_86735:229-5004(+)
ATGGGAGATAGATTAATGGAAAGTAGGGGCCAAAAACGATCAGAAATGGGTGACGAATTGCCTGCAGATAAACGAGCTTGTAGTTCGCTCGAGTTCAGACCGAGTTCATCAAGTGTAACTCCTCAAGCAATGGTTAATCATAATAATTCCACTTTGGAGACTCATGAAGCTGAGATGGAGACGTCATCATCTTCTGCTTCAGCCTCTGGACGATCTGAGGGTGATGGGGAAAGGGATTCTCCATATGGGTCTTGTGATTCCGATGATATGGGTGATCATCGATATAGCAGTCTTAGGGCGTTTCAACGTAGCCGATCATATGGTGATAATGCTAAGTTTAGTAGAATTGTGTCTAGTTTGAATAATGAAGCTGAGACTTCGGGGCAACTAGCAGCTTTGACTGAGCTTTGCGAAGTCTTATCATTTTGTACTGAAGATTCAGTGTCAAGCATGTGTGCTGATCAGTTAGCTCCGGTTCTTGTAAAGTTGGCTAAGCATGAGAGCAATCCAAATATAATGCTTTTGGCTATAAGGGCTTTAACTTATTTGTGCGATGTTTTCCCACGTTCATCAGGGTTTCTTGTAAGGCATGATGCTGTTCCTGCTTTGTGCCAGAGGCTGATTGTCATTGAGTATCTTGATGCTGCTGAGCAATGCTTACAAGCATTGGAAAAAATTTCGCGTGATCAACCACTTGCATGCTTGCAATCCGGGGCAATAATGGCTGTGCTAGGGTATATAGATTTCTTCTCTACCACTGTCCAGAGAACTGCACTCTCCGTAGTTGTTAATATATGTAAGAAGCTACCATCTGAATGTCCTTCACCTTTCATGGAGGCAGTTCCAAGACTGTGTAATCTTCTGCAGTATGAGGATCAGCAGCTTGTGGAGCTTGTAGCCACTTGCTTGATCAAAATAACAGACCGAGTAAAAGACTGTCCAGAGAGTTTGAGAGAACTTTGTGGGCATGGACTTATTCATCAAGTTACTCATCTCATAGACTTGAATAGTCGAATCAATTTAAGCAAACCAACTTACACCGGTCTTATTGGGCTAGTTACCAAGCTTGCATCTGGATCAGCAGATGCTGTTAGTACTCTTTTTGAACTTAATATTGGCTGCATTGTAAAGGAGGTTCTGTCTAATTCTGATTTGTCTCATGGAATGCCTTCCCCACGTGCATTGGACAAAAAATGTAATCAGGTGCATGAAGTTTTGAAGTTGCTTCATGAGCTGCTTCCTGAAGTAGCCAGAAACGAGAAAGAACTCTCGTTAAGCAAGGAAAGAATTTTGTTGGACTGGCCAGATAGGTTGCAGAAGTTTAGTATAGATGTTCTTCCTACATTAGTTCAGGTGGTTAGTTCTGGTGCAAGTTTATATGTTTGCTATGGATGCCTTTCCGTCATCAACAAATTAATTTATTTTAGCAAACCTGATACCCTTCAGGATTTGTTCAAGGGTATAAACATTGCAAGTTTTCTGGCGGGAGTTTTCTCTCGGAATGATCAACACATTTTGTTATTAGCTCTTCAGATTGCTCAAACAATCCTGGAAAAGCTTTCCAATGTGGCGATTCAATATTTTATTAAAGAAGGTGTTCTATTTGCCATTGATGCTCTTATTACTCCAGATGGGTGCTCTAAGTATACTTTCCCTGTCATCAATAGTGTCCAAAGTACAAGGTCTGGTGGTAAGGGGGTCACTAGTTGCTTGTGTTATGCCTATGTAACCAGGCAGCGATGTTCTACTCCAGAATCTGAGACATGCAAAGTGGAGCAAGACTCTGTTCAGAGTCTTGCTCAGCACATAAAGACAACATATTTCCCTGTAGATCTTAATAATTCCCACACCGTGGTGACTGATGTGCTTCGAGACCTCAGAAATGCTTCTGCAGTAATAGTGGATCTCGCCAAGACATGCCACGGCATGGAAGTAAGTTCCCAGAATGAAGAGGCACTCTGCACTGTATTGCATCAAGTCATACGCCAACTCAGTGGAAATGATCCTGTTTCAACATTTGAGCTCATAGAAAGTGGAATTATTAAAGCGCTACTAAACTACCTTGCCAATGGTCAGTACTCAAGTGGTTTGTGTACACCTGATATATTGACACATGGTTTTCGGGTACAGAAAAGATATGAAACCTTTGCGACTATGTCATTATCTTCATCTGATCCAGTCTCAGAAGACTTTCCTCTATCATTGCTTGTGAGGAAACTGCAAAGTGCATTGTCGACTGTGGAGACCTTTCCCGTTATAGTGGGCTATGCACCCAAGCATCGAAACTCTTATGCAACTGTTCCGAGCGGATGTTGCACAATGCATCCTTGTCTCAGAGTTCGTTTTGTAAGGGGAGAAGAAGAGTTGTGCTTGAGTGATTTCTCCGCAGATACTGTGACTGTTGATCCTTTTTCTCCGGTAGGAACAATTGAACAGTACCTGCGGGTCAAATTGGAACAGAAAATGATGAACTGCTCAGAACCTGGCATTCAGGCTTCTGGACAAGTAAAAACTGCACATATTCAGGCTCCTGTAGATGCTGCCTCCCTCCCAAGCAAGAGTGTTGAATTTGTGGGATCAGGGAGCATAGATGCTGTTTCACCTTATTCACAGGAAGACGTGGATAGCAGCTCACATCCTTCACCTATGGAAATATCGGATCTGGGTCAGACAACATCTGATACAAAACCCATAAGCGACAGTCAATCTGACCTGTTTGATGAGGAAGGTCATTCACCACAAGAAAATGAAAATCCAAAAAGTGAGAGTGCACGAAATGCAACTAGCTCAAAAAGCACCTGTCGACATGAGGAAGATTGTAAGAAGAACCATTGTCGAGCATCCTGCAGTGTCGATGGCGTTTCTTCAAAGCTGGCACTTTATCTCGAAGGAGAGCTGTTAGACTATTCATCTACACTATACCAAGAAATTCTTCGAAGACACGTCAAGTTACAACATGAACTTCAGAGTGTTCCAAAATTGTGGAGTGAAACCTACACTGTCACTTATAAAAGAGCTGCAGGAACTGAGTTAAACAGTCATGAGGATTGCAGTTCCTTCAATGATCATAATGCATCAGATAAAAGTTTGCTTTTCCAGCATGTTATGCCACTTATCTACAAGACACTTGTCCAGAACCTCGGTTCTTCTGTGGACCCATCAAGTCCTGTAAGTGATATACTACATCTTCTCAGAAGTTTGGAAATGATGAACCGGTTCACATACCATTTGGTGTCATGTGAAAGAATAAATGCTTTTGCTGAAGGTAAAATAAATAACTTGGACAAGCTAAAAGTTGCAGTTCCAAAACTATTGCAGCATGAGTTTGTTAACAACAAACTGACAGAGAAATTAGAACAACAGATGCGTGAACCTTCAGCTGTGCATATTGGAGCCATGCCATTGTGGTGTAGTCAGTTGATGGCTTCGTGTCCATTTCTATTTAGTTTTGAGGCAAGATGGAAGTACTTGCAGCTGTCTGCATTTGACAGATCACAAGTTCTATGTAATCTGCCATCCCATGGTGATACAGATGTGTCTCGAGAAAGGAGATCACCTACTGGTAACTTGCCTCGGAAAAAGATCCTGGTAGACCGTGATCGTGTTCTGGAGTCAGCTGCTCAAATGATGGACATGTATGCTCGTAAAAAAGTTGTTATTGAGGTTGAGTACAACGAAGAAGTTGGTACAGGTCTTGGTCCAACCCTAGAATTTTACACGCTAGTGAGTCATGAGTTTCAAAAGGCTGGCTTGTGTATGTGGAGAGGTGATTTTATGTCAACTACTAATGGCTACAACCACCAGGTTTCAGACTCTGGATATGTGACTTCCAACTCAGGACTTTTTCCTCGTCCCTGGTCACTAGCATCTAGCAACATTGGTGGAATAAATTTTTCGGATGTTATGAAGAAGTTTACCCTTCTTGGACAAATTGTAGGAAAGGCTCTTCAAGATGGAAGAGTGCTGGACATTCCTTTCTCCAAAGCATTCTATAAATTGGTTCTAGGAAAGGAGCTATCTCTCTATGATATTCAGTCATTTGATCCAGAGCTTGGAAGAACCCTGCTGGAGTTTCAGGCTCTTGTCACTAGACAAAAATGTTTGCAACTTGCTTGCAAGGAAGATATTGCTCCTGCTCTTAGTTCAGCTTTTCGAAGTACAAGTATTGAAGACCTATGTCTCGATTTTACACTTCCTGGATACTCTGATTACGTGCTAGCCTCTGGGCTGGATGACATGATGGTTAACTCTAGTAACTTGGAGGAGTATGTCTCTCTTGTTTTGGATGCAACCTTACGTACTGGAATATTAAGACAAGTGGAAGCTTTCAAGTCAGGTTTAAATCAGGTTATTCCTGATAAACAACTACGTCTTTTCACTGAGGAGGAGCTAGAGCGTTTGCTATGTGGAGAACATGATTCTTGGGTGTTCTGTGACTTGTTCGATCATGTCAAGTTCGATCATGGATATACAGCTGGCAGTCCTCCTATCATCAATTTGTTGGAGGTTATAAGAGAGTTCAACTATGAGCAACGACGTGCTTTTCTTCAGTTCATGACCGGTGCACCACGGCTGCCACCTGGTGGTTTGGCTGCACTTAGTCCAAAGCTGACAATTGTGCGCAAGCACTCCAATAATGGGGCTGATGCAGACTTGCCCAGTGTCATGACGTGTGCTAATTATCTGAAGCTGCCCCCCTACTCTTCAAAGGAAAAGTTGAAACAAAAGCTCTTGTATGCCATAACAGAAGGCCAAGGTTCATTCCATCTGTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86735.p1 GENE.R_Transcript_86735~~R_Transcript_86735.p1 ORF type:complete len:1592 (+),score=321.51,HECT|PF00632.21|5.6e-81 R_Transcript_86735:229-5004(+)
MGDRLMESRGQKRSEMGDELPADKRACSSLEFRPSSSSVTPQAMVNHNNSTLETHEAEMETSSSSASASGRSEGDGERDSPYGSCDSDDMGDHRYSSLRAFQRSRSYGDNAKFSRIVSSLNNEAETSGQLAALTELCEVLSFCTEDSVSSMCADQLAPVLVKLAKHESNPNIMLLAIRALTYLCDVFPRSSGFLVRHDAVPALCQRLIVIEYLDAAEQCLQALEKISRDQPLACLQSGAIMAVLGYIDFFSTTVQRTALSVVVNICKKLPSECPSPFMEAVPRLCNLLQYEDQQLVELVATCLIKITDRVKDCPESLRELCGHGLIHQVTHLIDLNSRINLSKPTYTGLIGLVTKLASGSADAVSTLFELNIGCIVKEVLSNSDLSHGMPSPRALDKKCNQVHEVLKLLHELLPEVARNEKELSLSKERILLDWPDRLQKFSIDVLPTLVQVVSSGASLYVCYGCLSVINKLIYFSKPDTLQDLFKGINIASFLAGVFSRNDQHILLLALQIAQTILEKLSNVAIQYFIKEGVLFAIDALITPDGCSKYTFPVINSVQSTRSGGKGVTSCLCYAYVTRQRCSTPESETCKVEQDSVQSLAQHIKTTYFPVDLNNSHTVVTDVLRDLRNASAVIVDLAKTCHGMEVSSQNEEALCTVLHQVIRQLSGNDPVSTFELIESGIIKALLNYLANGQYSSGLCTPDILTHGFRVQKRYETFATMSLSSSDPVSEDFPLSLLVRKLQSALSTVETFPVIVGYAPKHRNSYATVPSGCCTMHPCLRVRFVRGEEELCLSDFSADTVTVDPFSPVGTIEQYLRVKLEQKMMNCSEPGIQASGQVKTAHIQAPVDAASLPSKSVEFVGSGSIDAVSPYSQEDVDSSSHPSPMEISDLGQTTSDTKPISDSQSDLFDEEGHSPQENENPKSESARNATSSKSTCRHEEDCKKNHCRASCSVDGVSSKLALYLEGELLDYSSTLYQEILRRHVKLQHELQSVPKLWSETYTVTYKRAAGTELNSHEDCSSFNDHNASDKSLLFQHVMPLIYKTLVQNLGSSVDPSSPVSDILHLLRSLEMMNRFTYHLVSCERINAFAEGKINNLDKLKVAVPKLLQHEFVNNKLTEKLEQQMREPSAVHIGAMPLWCSQLMASCPFLFSFEARWKYLQLSAFDRSQVLCNLPSHGDTDVSRERRSPTGNLPRKKILVDRDRVLESAAQMMDMYARKKVVIEVEYNEEVGTGLGPTLEFYTLVSHEFQKAGLCMWRGDFMSTTNGYNHQVSDSGYVTSNSGLFPRPWSLASSNIGGINFSDVMKKFTLLGQIVGKALQDGRVLDIPFSKAFYKLVLGKELSLYDIQSFDPELGRTLLEFQALVTRQKCLQLACKEDIAPALSSAFRSTSIEDLCLDFTLPGYSDYVLASGLDDMMVNSSNLEEYVSLVLDATLRTGILRQVEAFKSGLNQVIPDKQLRLFTEEELERLLCGEHDSWVFCDLFDHVKFDHGYTAGSPPIINLLEVIREFNYEQRRAFLQFMTGAPRLPPGGLAALSPKLTIVRKHSNNGADADLPSVMTCANYLKLPPYSSKEKLKQKLLYAITEGQGSFHLS*

Click here to download the sequence:
Link to NCBI Protein BLAST