Transcript Information: R_Transcript_86780.p1


Annotated TAIR IDAT3G24870.1
Annotated Gene NameHelicase/SANT-associated, DNA binding protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9075237-9084278 | Reverse length=1907
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3121583678992
Replicate 22.8404889003371
Replicate 33.2261382076358
Condition 2: 8 Hour
Replicate 13.0777286077052
Replicate 24.4134804643632
Replicate 35.0212431196224
Condition 3: 24 Hour
Replicate 15.4236515813052
Replicate 23.8855554532112
Replicate 35.0714065882311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86780.p1 GENE.R_Transcript_86780~~R_Transcript_86780.p1 ORF type:complete len:1981 (+),score=553.67,HSA|PF07529.9|8.5e-08,HSA|PF07529.9|83,HSA|PF07529.9|1.6e+04,HSA|PF07529.9|1.6e+04,Myb_DNA-bind_6|PF13921.2|7.4e-07,Myb_DNA-bind_6|PF13921.2|5.1e+03 R_Transcript_86780:813-6755(+)
ATGCATGGATTTAGTGCAGGATATAGTTTCCTCGTAAATGCTGAGGTTGATTCCATGGGAGGAGTTGTTGACGGTGGAGTTGGAATTGGTACCAAACCCTCTCCACGCCGAGCGGCAATTGAGAAGGCACAAGCTGAGCTAAGGGTGGAATATGATGTTCGGGAGGAAAGAAGGAGAGAGCTTGAGTTTCTTGAGAAAGGTGGAAATCCTCTTGATTTTAAATTTGGACATGCAGCTTCAGTGAGTGTCCAGTCCACCTCACGCACAGATCAACACCCGGATCAGTTTTTGACCAGTGAAGCAAAGGGGAGTTTTGCATTGACTGCCTCACCTCATGATGATTCTGTTGAAAGTAGTGGGAGATTGGGGGTTAACACAGCCTGTGAACCTAACAGTGCAGATAATTTTGATGGTGAAAATGAATTGGTTGAAAGTGAGAGAAAGTCCATGCATCATGGCAGAGGTAGTGTTACACTGTCGGAGCATTCTTCTCAGCTTGATGGGAGCCAAAACGTTAAGGAGTCAGAAGACTCACCTATTTTTCAAGCTAAAAAAGGTCAAGCATATAGAAGAAGGAACCGGTCCAAAGCAAACCGTGATGGCCCTCGGGCCAATTCTGCTGAAATGGCAACTCGTGGTGGTCATGGTCCTTCTTTGCCAAATCGCCAGGGATTACTTTCCAAACCTATTGCTTCTGAGAATCAGTTTGAACTGGAGTCAGACGGCACACATGCTCCACATTCTACTACAACCTCAAGAGCCAGTGATTTTCCTGAAGGTAAGCTAGATGTATCAACTTCCAAGGATAAGCAGGAGGAACTGCGTAATCAAAATCTAAAAGCTGAGGAAGCTCCTGTTGCTACAAGTAGTGCCGAACCTGATTTAGTTGCAGGGAAGGAGAACATGGTTCCAGTGGATGTTGATTATTCTCCATGTTTAGGTTCAGAGAGAACTGAAGATAATGCTATTGCTGCACAGCGGAATGAGACTGGTAAGATGGGTGCGGATGAGAAATGCACACAAACTGAAGGTCTTATTAGCAATGCAGTGTCGACCATGAAGGCTTTAGATGCTGAGTCTTCTTGCACTCAAAATAGCCTTAGTGTAGATGGAAATGGAAATATAGATAGTGAGTTACATAATAACTTAAGAAATGTAGATAGTAATGGGGCTGCTAAGGAACATATGGAGAAGTCCCTTAGTAAAGATGAGAAAGTGCTGAATGAAAAGCATGCTACCAGTGCTTTGGAAGGTGGTACTTGTAAGGAGGACCAGACTCCTATCAGTCACCAAGACAATGGTTTTGCAGATAAAGATCAGGAAGCAGTTGACAAAGGAAAATCCTCTGCCAGAGATGAGGCCAAGGGACCCTCTACTGTGGCAGAGCAGGAAGCAAATAATCATATGCAAATGAAATCAGAGGTACAGTCAGGTCTAGTTGAGAACTCCATTCTGAAATTGGAGGCCTCATCTCCTCTGAGACCACCTTCCTCTGCACATCCCTGTTCCCATGAGTTTCATCAGATGGATTTGCCTTGTCCACATCATGTTGTGCAGCCTCAAACTTGTTCTGAAGAGCAGCCGAAGCTGGTTGATACGGCACATGAGGATAGAATATTGGAAGAGGCACGGATTATTGAGGTGAAACGTAAGAGAATTGCAGAGTTATCTGTTGGTTTGCTGCCAAGAGAGTATCGGCGGAAGTCTCAATGGGATTTTGTTCTTGAGGAGATGGCTTGGTTGGCAAATGATTTTGCTCAGGAGCGCCTTTGGAAAATGTCTGCAGCTGCTCAAATTGGCCACCGGGCTGCTTTTGCTTCTCGATCAAGGTTAGAGGAGCAAAATAAATGCTGGAAGCAGAAAAGTGTAGCTCACACTTTGGCAAAGGCTGTTATGGATTTCTGGGAATCAGCTCGGTTGCTTGCGGAGAATGTTAATAGTTCTCAGTCAGAAAAATGCATTGATGATGCAAGGACTGATGAAGCTGAAGTAGCAGGCTGCAGGGCTGGGGGTCCCGATAAGGATGAGGCCCCTGAACAGGAGGTGCAATCTCATGGATGGAAAAGGGATCTTGCTGTCCACAGCTATGCTGTTAGATTTTTGCAGTTTAATGGGTCCTCAACAGATATTGTCAAAGTTGCAGTTCCTGAGATTGCTTCTGTAGCATTTGATATTGACGTTCCACAAGTTTCGTGGCAGGATCAGTTTACAGAAGAAAACCTCTTCTATGTAGTCCCTCCTGGTGCAATGGAGACCTACAGAAAATGCATTGAATCATGCCTGGCTGAGTCCGAGAGGGCGGGCAACACTATGCAAGAGGAAGTTGATACATCCATGTATACTGCAACAGAAATTGGATACCAAGAGAATGATTATGAAGAAGATGAAGGGGAAAATTTATATTATCTGCCTGGAACTTTTGACACTGGGAAGCCATCAAAAAAGAAACGGAAAAATATGAAGTCTTCTGCCGCTAGATCATATGAATCAGGAGGTGATCTTGGTTATGGGCACTGCATGGAGAACAGGATTGGAACCCCACATTCTTCCTTAATGGGAAAAAGGCCTTCCAATAATCTTCATGTTGGTCCCATTCCTACAAAAAGGATGCGTACTGCCTCTAGGCAAAGGGTTGTGGGCCCTTTCAGTGCTGGGCCTGCTGGACTTGCATCAGCACCGAGTAGGGCTGATGCTTCTAGTGGAGATACTAATTCTTTTCAGGATGACCACAGCACTTTGCATGGTGGTTCTGTTGTCCCCAGAGGCTCAGAGGTTGATTCAGCAATGGATTTTGAGAAGCAATCTGCTTTTGATTCTACAGAAATTTTAGCCAAACCTAAGAAGAAAAAGAAAATAAAGCATCAGGGTGCAGCATATGACCCGAGATGGCAGCTTGAATCTGCTATGCAGAATGAACAGAAGGATCATGTAAGAAAGAGATTAGACGGTTATCAGCTTGAATCCAATGGAAATAGTAGTGTATTTGGGCAGCATGCTAAGAAGCCAAAGATTATAAAGCAGTCTGTGGATTGTTCATTTGATGACACAGTGCCCATGAGTGGGTTGGTTGCTTCACCAGTGGCTTCTCAAATGAGTAACATGTCCAACCAAAGTAAAATCATTAAATTGATTGGGGGGCGGGATAGAGGTAGAAAAGCAAAAGCTCTCAAGGTGGCTGCTGGACAGGCTGGTTCAGGAAGCCCATGGTCGTTATTTGAAGATCAGGCACTTGTTGTGCTTGTTCATGATATGGGTCCAAATTGGGAGCTTGTAAGTGATGCTATCAATAGCACTTTGCAATTTAAGTGTATATTTCGCAAGCCGCAAGAATGCAAAGAGCGGCATAAAGTTTTGATGGACAGGACTTCTGGTGATGGGGCTGACAGTGCTGAAGATTCAGGATCATCTCAACCTTATCCTTCCACTCTACCTGGCATTCCAAAGGGAAGTGCAAGACAATTGTTTCAACGTCTGCAGGGACCCATGGAGGAGGATACCATTAAGTCTCATTTTGAGAAGATAATTCACATCGGCCAGCCGCTGCACTACCGGAAGAAACAGAATGATAATCAGGATCTGAAGCAAATAGCACCTGTTCACGGTTCACATGTGGTTGCGCTTTCCCAAGTCATTCCCAACAATGTGAATGGGGGTATTCTAACACCACTTGAGCTATGTGATGTTGCTGCATCAAATCAAGACTTGCTTCCTCTTGGATATCAAGGTCCTCATGCTGGTGGGTTGGCTTTGCCCAATCAAGGAGCTATTCCACCGATGCACCCTCCTAATGGGTTTAATTCCTCTCTTCAAGGCATTCAAGGTTCTCCTAGCATGGGTGTTGGTAACAATTTAGCATCACCATCTGCCCACTATAACAACTCCCGACACCCAACTCCTAGATCCGGATCTTTGCCAATTGAGGAGCAGCAGAGACTCCAGCAATATAGTAACATGTTATCAGGAAGAAACATTCAGCCATCAAACTTGCCATCTTCTGGAGGTCTTTCAGGAACTGATCGTGGTGGTCGTATGCTTCCTGGTGGCAATGGTGTTGGCATGATGGCTGGAATGAACCGAAGCATGCCAATGCCAAGACCAGGACTTCAAGGAATTGTGTCGTCTTCAATGCTTAATTCTGGGAATATGCTGCCTGGCAACATGAACATGCACTCTGGAGCAGCTCCTGGTCAAGGAAACTCGATGTTTAGACCTCGTGAAGCAATGCATATGGTGCGGCCTGGGCAGAGTTCAGATCATCAAAGACAGATGATGTTGCCAGAAATGCAGATGCAGGGGACCCAATCTAATAGTGCAGGAGTCTCTCCGTATGGTGGGATGAATTCTGGGTTCTCTTCCCAGGCTGCTTCTCCACCCGTTCAACCGTACCCTGGCCATCACCAGCAACCGCATCCAATGTCGCAGCAACAGTCCCATGTGCTTGGCAGTTCTCATCATCCGCATCTCTCAGGATCGAATCATTCTGCTACTACTGATCAAGCAATTCTCCGTCTTGCTCGAGAGAGGCAGTTTCAGCAGCAGCAGAGGTTATTGCAGAGGCAGCAACAACAGAAGCATCAACAGCTTCCTGCATCCAGTGCATTAATGACACATGCTCAGACTGCAGCCCAAATCCCTATATCATCTTCTCTGCAGAGCAACTCCCAGCTTCAGCCACAAACTTCTTCTCCACCTGGATCGCTGCCCTCTCTAACTCCAACATCCTCAATGGTTCATGTGTCTTCACAGCCACAACAGCAGCCAAAGCACCAGGTGCCATCTCATGGACTTGTGAGAGGCACACAGAGTGCTGTAAGTGGAATGTCAAATCAAGTGGGGAAGCAACGGCAACGGCAAGCATCACAGCTTCAGCAGCAGTATCAGCAATCTGGGAGGCAACATCCACAGCAGCGCCAACAATCTCAGCCTCAGCAGCAGGCTAAAGTTCTGAAAGGAATAGCACGAAATAATATGCTGATGCATCAAAGTCTTCCCATGGATCCGTCTCACCTTAATGGCATTTCAGCAAATCCAGGAGCCCAAGCTACTGAGAAAGGGGAGCAACCTGTTCATTTGATGCAAGGCCAGGGCTTATATTCAGCTTCAGGCCTAAACACGATGCAGCAATCCAAATCTCTAGCCAGTCCTCAGACTTCAAATCACTCCCAGCCTCAAAAAACATATGCAACTACTGTCCCAGCAACTACAAAGCAAGTCCAGCAAACACCTTCTCACCTAGATAGCAACCAAACCCAGATTCCAGCAGTCCCTTCTGCTCCTGCAGCAGCAGCATCAAATCAAGGTGTTTCATCGACTGTAATGCCTTCTCTTGGGCATCAAAATTTGCAAGGGCAGTCTAAACCGTCTATAAAGGTGGTCAGTCATCAGTCTAATCTTCAGAGGCCAATTCAACCAAGTCGTCAAGTGCATTCTGATTCCTTGGCCAAATCGCAAGCTGATCAGAGCCCATTGGAGCAGCAATTCGGAAATAATAATTCGAAGAGCAACAGCTCTGGGATCCCAGTGGGATGTGTTGATTCTACAAATGTGATGCCTCTGTCATCTTCTGCCACCACTGCTGCACGGAAGGCACAGGAATCACTGTGTGATACTGTTATGCCAAGTTCATCCACTTCTTCAGGTCCCATTGGCAGCCCAGTTCTTGCAAATTCATCAGGTAATGAGCCACTGCCATCAGTTAGTCAAGCTCCGGTGCAGAGGCAGTTATCAGGTAACTCGGTAGCCCATGGGCATAGTGTTGGGTCACAATGGCAGCAACAGCAATCCCAGTTACAACAGCCTCCACCAGTGCAACCCAAATTGCCGCAGAAGCAGTCACAACAGAAGCTACAGCAGCTTGAACAATCACCCCAGACAGTGCCACAACAGCAGCCTCAGCCACAGATTCAATCTGGGCCAGGTGGTTATGTTCGCAAGGAGCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86780.p1 GENE.R_Transcript_86780~~R_Transcript_86780.p1 ORF type:complete len:1981 (+),score=553.67,HSA|PF07529.9|8.5e-08,HSA|PF07529.9|83,HSA|PF07529.9|1.6e+04,HSA|PF07529.9|1.6e+04,Myb_DNA-bind_6|PF13921.2|7.4e-07,Myb_DNA-bind_6|PF13921.2|5.1e+03 R_Transcript_86780:813-6755(+)
MHGFSAGYSFLVNAEVDSMGGVVDGGVGIGTKPSPRRAAIEKAQAELRVEYDVREERRRELEFLEKGGNPLDFKFGHAASVSVQSTSRTDQHPDQFLTSEAKGSFALTASPHDDSVESSGRLGVNTACEPNSADNFDGENELVESERKSMHHGRGSVTLSEHSSQLDGSQNVKESEDSPIFQAKKGQAYRRRNRSKANRDGPRANSAEMATRGGHGPSLPNRQGLLSKPIASENQFELESDGTHAPHSTTTSRASDFPEGKLDVSTSKDKQEELRNQNLKAEEAPVATSSAEPDLVAGKENMVPVDVDYSPCLGSERTEDNAIAAQRNETGKMGADEKCTQTEGLISNAVSTMKALDAESSCTQNSLSVDGNGNIDSELHNNLRNVDSNGAAKEHMEKSLSKDEKVLNEKHATSALEGGTCKEDQTPISHQDNGFADKDQEAVDKGKSSARDEAKGPSTVAEQEANNHMQMKSEVQSGLVENSILKLEASSPLRPPSSAHPCSHEFHQMDLPCPHHVVQPQTCSEEQPKLVDTAHEDRILEEARIIEVKRKRIAELSVGLLPREYRRKSQWDFVLEEMAWLANDFAQERLWKMSAAAQIGHRAAFASRSRLEEQNKCWKQKSVAHTLAKAVMDFWESARLLAENVNSSQSEKCIDDARTDEAEVAGCRAGGPDKDEAPEQEVQSHGWKRDLAVHSYAVRFLQFNGSSTDIVKVAVPEIASVAFDIDVPQVSWQDQFTEENLFYVVPPGAMETYRKCIESCLAESERAGNTMQEEVDTSMYTATEIGYQENDYEEDEGENLYYLPGTFDTGKPSKKKRKNMKSSAARSYESGGDLGYGHCMENRIGTPHSSLMGKRPSNNLHVGPIPTKRMRTASRQRVVGPFSAGPAGLASAPSRADASSGDTNSFQDDHSTLHGGSVVPRGSEVDSAMDFEKQSAFDSTEILAKPKKKKKIKHQGAAYDPRWQLESAMQNEQKDHVRKRLDGYQLESNGNSSVFGQHAKKPKIIKQSVDCSFDDTVPMSGLVASPVASQMSNMSNQSKIIKLIGGRDRGRKAKALKVAAGQAGSGSPWSLFEDQALVVLVHDMGPNWELVSDAINSTLQFKCIFRKPQECKERHKVLMDRTSGDGADSAEDSGSSQPYPSTLPGIPKGSARQLFQRLQGPMEEDTIKSHFEKIIHIGQPLHYRKKQNDNQDLKQIAPVHGSHVVALSQVIPNNVNGGILTPLELCDVAASNQDLLPLGYQGPHAGGLALPNQGAIPPMHPPNGFNSSLQGIQGSPSMGVGNNLASPSAHYNNSRHPTPRSGSLPIEEQQRLQQYSNMLSGRNIQPSNLPSSGGLSGTDRGGRMLPGGNGVGMMAGMNRSMPMPRPGLQGIVSSSMLNSGNMLPGNMNMHSGAAPGQGNSMFRPREAMHMVRPGQSSDHQRQMMLPEMQMQGTQSNSAGVSPYGGMNSGFSSQAASPPVQPYPGHHQQPHPMSQQQSHVLGSSHHPHLSGSNHSATTDQAILRLARERQFQQQQRLLQRQQQQKHQQLPASSALMTHAQTAAQIPISSSLQSNSQLQPQTSSPPGSLPSLTPTSSMVHVSSQPQQQPKHQVPSHGLVRGTQSAVSGMSNQVGKQRQRQASQLQQQYQQSGRQHPQQRQQSQPQQQAKVLKGIARNNMLMHQSLPMDPSHLNGISANPGAQATEKGEQPVHLMQGQGLYSASGLNTMQQSKSLASPQTSNHSQPQKTYATTVPATTKQVQQTPSHLDSNQTQIPAVPSAPAAAASNQGVSSTVMPSLGHQNLQGQSKPSIKVVSHQSNLQRPIQPSRQVHSDSLAKSQADQSPLEQQFGNNNSKSNSSGIPVGCVDSTNVMPLSSSATTAARKAQESLCDTVMPSSSTSSGPIGSPVLANSSGNEPLPSVSQAPVQRQLSGNSVAHGHSVGSQWQQQQSQLQQPPPVQPKLPQKQSQQKLQQLEQSPQTVPQQQPQPQIQSGPGGYVRKEH*

Click here to download the sequence:
Link to NCBI Protein BLAST