Transcript Information: R_Transcript_86800.p1


Annotated TAIR IDAT1G51580.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19125612-19128102 | Forward length=621
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3823378126955
Replicate 21.475778304021
Replicate 32.5614562807199
Condition 2: 8 Hour
Replicate 13.0509544183468
Replicate 21.0716077559674
Replicate 32.1457175493748
Condition 3: 24 Hour
Replicate 13.9607718539809
Replicate 24.2278451547432
Replicate 34.6852275208374


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86800.p1 GENE.R_Transcript_86800~~R_Transcript_86800.p1 ORF type:3prime_partial len:313 (+),score=55.92,KH_1|PF00013.25|2.5e-13,KH_1|PF00013.25|1.7e-09,KH_1|PF00013.25|1.8e-13,KH_3|PF13014.2|2.5e-09,KH_3|PF13014.2|1.5e-08,KH_3|PF13014.2|4e-11,KH_2|PF07650.13|0.012,KH_2|PF07650.13|0.0082,KH_2|PF07650.13|0.032,KH_5|PF13184.2|0.65,KH_5|PF13184.2|0.94,KH_5|PF13184.2|0.013,KH_4|PF13083.2|15,KH_4|PF13083.2|12,KH_4|PF13083.2|0.00011 R_Transcript_86800:276-1211(+)
ATGGAACCACCCTTCTCCTTCAAACGCCACCACCAGAACCACCACCACCCACCACCACCACCACCACAACTATCACAGCAACCAAGACCCTTACCTCCGGAAACCTTATTCAGAATCCTCTGCCCAGCCACCAAAGCCGGGGGCATAATCGGAAAAGGAGGCGCCGTAATCCGACAGCTCCGCGACGAAACCGGAGCACGTATTCGGATCATCGACGACTTCGTCCCCCCTCACTGCGAAGAGCGAGTCATTCTCATCGCCGCCCCGAGTTCCGACTCCGTAAACCCTAACTCCGGCGACGAGAATGGCGGTTTTTCTTCGGTGGCGCAAATGGCACTGGTTAGGGTTTTCGAGAGGATACTGAAGGTGGACGAGGAGAGGAGTGAGAGAAATGAAGAGAATGGGTTTAATGGAGGCGAAGTTAATGGCGGGATGGGCCAACACGTGGTTTGTAGGTTGTTGGCTCCTAGTCATCAAGTTGGGTGTGTTTTGGGAAGAGGTGGGAAAATTGTGGAGAAAATTAGGCAAGAGAGTGGTGCTAGGGTTAGGGTTTTGCCTAGAGAGGGTATTCCTTCTTGTGCTTCTCCTGGTGATGAACTCATTCAGGAACACCCCAAAGCAGATATGTTTCATGGAGCTAACAATCCTGCTCACACAGATGCTTTCCCTCAAAGAGGAACACATGCTTCAGATTTTCACTCCAGGGGTTACCCAACAGGGTCAGCTCCTGAAAATTTTGGACCTAACAATGGGATGGTTGTTGAAGAGGATGTAATCTTCAGATTGCTATGTCAAGCAGATAAAATTGGTAGTTTGATAGGAAAAGGTGGTTCCATAATACGAGCTATTCAAACTGAAACTGGCGCGTCGATCAAGATTGGTGATGCTATTGCACCTGATTCAGATGAGCGAATTGTAGTGATTTCGGCACGAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86800.p1 GENE.R_Transcript_86800~~R_Transcript_86800.p1 ORF type:3prime_partial len:313 (+),score=55.92,KH_1|PF00013.25|2.5e-13,KH_1|PF00013.25|1.7e-09,KH_1|PF00013.25|1.8e-13,KH_3|PF13014.2|2.5e-09,KH_3|PF13014.2|1.5e-08,KH_3|PF13014.2|4e-11,KH_2|PF07650.13|0.012,KH_2|PF07650.13|0.0082,KH_2|PF07650.13|0.032,KH_5|PF13184.2|0.65,KH_5|PF13184.2|0.94,KH_5|PF13184.2|0.013,KH_4|PF13083.2|15,KH_4|PF13083.2|12,KH_4|PF13083.2|0.00011 R_Transcript_86800:276-1211(+)
MEPPFSFKRHHQNHHHPPPPPPQLSQQPRPLPPETLFRILCPATKAGGIIGKGGAVIRQLRDETGARIRIIDDFVPPHCEERVILIAAPSSDSVNPNSGDENGGFSSVAQMALVRVFERILKVDEERSERNEENGFNGGEVNGGMGQHVVCRLLAPSHQVGCVLGRGGKIVEKIRQESGARVRVLPREGIPSCASPGDELIQEHPKADMFHGANNPAHTDAFPQRGTHASDFHSRGYPTGSAPENFGPNNGMVVEEDVIFRLLCQADKIGSLIGKGGSIIRAIQTETGASIKIGDAIAPDSDERIVVISARE

Click here to download the sequence:
Link to NCBI Protein BLAST