Transcript Information: R_Transcript_86801.p1


Annotated TAIR IDAT1G51580.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19125612-19128102 | Forward length=621
E-Value1.2E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.514481075537
Replicate 29.8692287671079
Replicate 312.526572326007
Condition 2: 8 Hour
Replicate 110.493942120248
Replicate 29.1710529210392
Replicate 311.822247162894
Condition 3: 24 Hour
Replicate 115.693124756265
Replicate 212.67076317216
Replicate 316.306508100069


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86801.p1 GENE.R_Transcript_86801~~R_Transcript_86801.p1 ORF type:complete len:651 (+),score=125.95,KH_1|PF00013.25|7.4e-13,KH_1|PF00013.25|5.4e-14,KH_1|PF00013.25|2.1e-13,KH_1|PF00013.25|8.9e-14,KH_1|PF00013.25|8.6e-06,KH_3|PF13014.2|6.6e-09,KH_3|PF13014.2|2.5e-10,KH_3|PF13014.2|1.1e-10,KH_3|PF13014.2|2e-06,KH_3|PF13014.2|3.5e+03,KH_3|PF13014.2|2.8,KH_2|PF07650.13|0.032,KH_2|PF07650.13|0.021,KH_2|PF07650.13|0.083,KH_2|PF07650.13|2.9,KH_4|PF13083.2|48,KH_4|PF13083.2|31,KH_4|PF13083.2|0.00028,KH_4|PF13083.2|13,KH_5|PF13184.2|1.6,KH_5|PF13184.2|2.4,KH_5|PF13184.2|0.0096,KH_5|PF13184.2|4.6e+02 R_Transcript_86801:276-2228(+)
ATGGAACCACCCTTCTCCTTCAAACGCCACCACCAGAACCACCACCACCCACCACCACCACCACCACAACTATCACAGCAACCAAAACCCTCACCTCCGGAAACCTTTTTCAGAATCCTTTGCCCAGCCACCAAAGCCGGGGGCATAATCGGAAAAGGAGGCGCCGTAATCCGACAGCTCCGCGACGAAACCGGAGCACGTATTCGGATCATCGACGACTTCGTCCCCCCTCACTGCGAAGAGCGAGTCATTCTCATCGCCGCCCCGAGTTCCGACTCCGTAAACCCTAACTCCGGCGACGAGAATGGCGGTTTTTCTTCGGTGGCGCAAATGGCACTGGTTAGGGTTTTCGAGAGGATACTGAAGGTGGACGAGGAGAGGAGTGAGAGAAATGAAGAGAATGGGTTTAATGGAGGCGAAGTTAATGGCGGGATGGGCCAACACGTGGTTTGTAGGTTGTTGGCTCCTAGTCATCAAGTTGGGTGTGTTTTGGGAAGAGGTGGGAAAATTGTGGAGAAAATTAGGCAAGAGAGTGGTGCTAGGGTTAGGGTTTTGCCTAGAGAGGGTATTCCTTCTTGTGCTTCTCCTGGTGATGAACTCATTCAGATAACAGGAAACTTTCAAGCTGTAAAGAAAGCCCTCTTATCTGTTTCAACTTGTCTTCAGGAACACCCCAAAGCAGATATGTTTCATGGAGCTAACAATCCTGCTCACACAGATGCTTTCCCTCAAAGAGGAACACATGCTTCAGATTTTCACTCCAGGGGTTACCCAACAGGGTCAGCTCCTGAAAATTTTGGACCTAACAATGGGATGGTTGTTGAAGAGGATGTAATCTTCAGATTGCTATGTCAAGCAGATAAAATTGGTAGTTTGATAGGAAAAGGTGGTTCCATAATACGAGCTATTCAAACTGAAACTGGCGCGTCGATCAAGATTGGTGATGCTATTGCACCTGATTCAGATGAGCGAATTGTAGTGATTTCGGCACGAGAGAACTTAGACCTAAAACGCTCACCTGCTCAGGATGCCGTCATTCGTGTGCATAACAGAGTAGCAGAGGTTGGATTTGAACCAGGTGCTGCCATTGTTGCTCGGCTTGTTGTCCCTCCACAGCAAATAGGTTGTTTATTGGGTAAAGGAGGCCACATTATTGCTGAGATGAGACGACTTACTGGTGCTAGTATTCGAATTTTTGGCAGGGAACATGGTTCGAAGTTGAATACCCCAAATGATGAAGTTGTGCAGGTCATTGGGAGCGTGCAGTCGGTGCAGGATGCTTTGTTTCAGATTACCAGTAGGCTTAGGGAAATTGTATTTCCACCAAGGCCACACATTTCACATGTCAGTGGCCCCCCTTACATGAATACCTTTCCAGAGTTTCCGTCTCCATTTCGGCCTAGACATGATCAAGCTTCCCCAGGTCACTATCATCCGCCAGCTGGATTCTCTCATAGCTATGACAACCGTTCAGCTGGTCAGGGGCAAGCCCATCCTTCTAGCTTAACACAGGGTACAGATAGAACTGGTGTAGCAAATAGTGAAAACGAGCGCCATCATTATGCAGGTGATAGAGCTTCTTATGGTCAGTTTGAGCAGCCACCATCTCCTAGAGCATGGCAACACCAGGCAGTTAACAATGCAAATTCTACAAGATTTCCTGACACAGGGCCTGGGCCTTCTGGGATGGTTGCAACCAGTAGTGAAAGTGGCCAAATGCAAATCATGACATCTGTGGAAGTGGTAGTTCCCCAAATACTGTTGCCCCACGTTTATGGAGAAAACAAAACTAATCTTGGTCATATTACTCAGTTCTCTGGAGCAGAGGTAGTTGTTCATGATCCAAAGCCTGGAGCGACTGAGGGTCTGGTTGTCATATCAGGAACTGCAAGTCAGTTGCATGCTGCTCAAAGCCTTCTTCAAGCCTTCGTTCTCTGTGGCCAAGCATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86801.p1 GENE.R_Transcript_86801~~R_Transcript_86801.p1 ORF type:complete len:651 (+),score=125.95,KH_1|PF00013.25|7.4e-13,KH_1|PF00013.25|5.4e-14,KH_1|PF00013.25|2.1e-13,KH_1|PF00013.25|8.9e-14,KH_1|PF00013.25|8.6e-06,KH_3|PF13014.2|6.6e-09,KH_3|PF13014.2|2.5e-10,KH_3|PF13014.2|1.1e-10,KH_3|PF13014.2|2e-06,KH_3|PF13014.2|3.5e+03,KH_3|PF13014.2|2.8,KH_2|PF07650.13|0.032,KH_2|PF07650.13|0.021,KH_2|PF07650.13|0.083,KH_2|PF07650.13|2.9,KH_4|PF13083.2|48,KH_4|PF13083.2|31,KH_4|PF13083.2|0.00028,KH_4|PF13083.2|13,KH_5|PF13184.2|1.6,KH_5|PF13184.2|2.4,KH_5|PF13184.2|0.0096,KH_5|PF13184.2|4.6e+02 R_Transcript_86801:276-2228(+)
MEPPFSFKRHHQNHHHPPPPPPQLSQQPKPSPPETFFRILCPATKAGGIIGKGGAVIRQLRDETGARIRIIDDFVPPHCEERVILIAAPSSDSVNPNSGDENGGFSSVAQMALVRVFERILKVDEERSERNEENGFNGGEVNGGMGQHVVCRLLAPSHQVGCVLGRGGKIVEKIRQESGARVRVLPREGIPSCASPGDELIQITGNFQAVKKALLSVSTCLQEHPKADMFHGANNPAHTDAFPQRGTHASDFHSRGYPTGSAPENFGPNNGMVVEEDVIFRLLCQADKIGSLIGKGGSIIRAIQTETGASIKIGDAIAPDSDERIVVISARENLDLKRSPAQDAVIRVHNRVAEVGFEPGAAIVARLVVPPQQIGCLLGKGGHIIAEMRRLTGASIRIFGREHGSKLNTPNDEVVQVIGSVQSVQDALFQITSRLREIVFPPRPHISHVSGPPYMNTFPEFPSPFRPRHDQASPGHYHPPAGFSHSYDNRSAGQGQAHPSSLTQGTDRTGVANSENERHHYAGDRASYGQFEQPPSPRAWQHQAVNNANSTRFPDTGPGPSGMVATSSESGQMQIMTSVEVVVPQILLPHVYGENKTNLGHITQFSGAEVVVHDPKPGATEGLVVISGTASQLHAAQSLLQAFVLCGQAF*

Click here to download the sequence:
Link to NCBI Protein BLAST