Transcript Information: R_Transcript_86833.p1


Annotated TAIR IDAT1G54690.1
Annotated Gene Namegamma histone variant H2AX
Annotated Gene Symbol(s)HTA3, H2AXB, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:20414607-20415206 | Reverse length=142
E-Value2.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1173.40312906983
Replicate 2266.60117256991
Replicate 3214.78601486763
Condition 2: 8 Hour
Replicate 1115.17425364075
Replicate 294.274582083517
Replicate 3110.59036840939
Condition 3: 24 Hour
Replicate 1285.555441752
Replicate 2268.47512674209
Replicate 3261.84180051362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86833.p1 GENE.R_Transcript_86833~~R_Transcript_86833.p1 ORF type:complete len:162 (+),score=32.87,Histone_H2A_C|PF16211.1|2e-16,Histone|PF00125.20|2.7e-14 R_Transcript_86833:48-488(+)
ATGGCCGGCAAAGATGGATCAGCAGCCAAAACCGGAGGCAGAGGAAAGCCCAAAGGAGCAGCCAAGTCAGTGTCTCGCTCCACCAAAGCGGGTCTCCAATTCCCAGTGGGTCGGATCGCCCGGTACTTGAAGAAGGGCCGTTATGCCCAGCGGGTCGGGTCGGGTTCCCCTGTTTACCTCTCTGCTGTTCTCGAGTACCTCGCTGCTGAGGTGTTGGAGCTTGCTGGGAATGCGGCAAGGGACAACAAGAAGACGAGGATAATTCCGAGGCATATACAGTTGGCGGTGAGGAACGACGAGGAGTTGAGCAAGTTGTTGGGGTCGGTGACGATTGCGAGTGGCGGAGTTTTGCCGAAGATTCACCAGGTTTTGATTGCTAAGAAGAGTAAGAGTGGTGGTGATAACAAGGGTGAAAAGGGCAGTCTTTCTCAAGAGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86833.p1 GENE.R_Transcript_86833~~R_Transcript_86833.p1 ORF type:complete len:162 (+),score=32.87,Histone_H2A_C|PF16211.1|2e-16,Histone|PF00125.20|2.7e-14 R_Transcript_86833:48-488(+)
MAGKDGSAAKTGGRGKPKGAAKSVSRSTKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVLPKIHQVLIAKKSKSGGDNKGEKGSLSQEF*

Click here to download the sequence:
Link to NCBI Protein BLAST