Transcript Information: R_Transcript_86840.p3


Annotated TAIR IDAT5G57550.1
Annotated Gene Namexyloglucan endotransglucosylase/hydrolase 25
Annotated Gene Symbol(s)XTR3, XTH25
Annotation TypeOrtholog
Chromosome Positionchr5:23305055-23306384 | Reverse length=284
E-Value4.5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6750028985364
Replicate 23.2580466163221
Replicate 31.7772468824601
Condition 2: 8 Hour
Replicate 11.4775952985407
Replicate 22.3131946732261
Replicate 31.8777528227986
Condition 3: 24 Hour
Replicate 11.7812091814598
Replicate 21.330920795121
Replicate 31.6981839843282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86840.p3 GENE.R_Transcript_86840~~R_Transcript_86840.p3 ORF type:complete len:116 (+),score=9.72,XET_C|PF06955.8|5.1e+03,XET_C|PF06955.8|1.9e-19,Glyco_hydro_16|PF00722.17|1.8e-07 R_Transcript_86840:2933-3280(+)
ATGGGAATACCATTCCCAAAGATGCAGGCAATGAAGCTGTATTCAAGCATATGGAATGCAGATCAGTGGGCAACCCAAGGTGGTCGTATAAAGACGGACTGGAGTCAAGCCCCGTTCAGTTCGTCGTACCGTAATTTCAAGGCTGAAGCATGTGTTCAAGTTCGAGCAAAGAGAGCAGCTACAATGTCCTGCTCTCCAGCGGCTAGATATACCTGGATGACCCGCAAGTTGGACGGTACCAGCCAAGACAGGCTCAATTGGGTCCGTAAAAACTTCATGATCTACAACTACTGCACCGACACTACGAGGTTTCCTCAAGCCCTCCCCAAGGAATGTCATCTCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86840.p3 GENE.R_Transcript_86840~~R_Transcript_86840.p3 ORF type:complete len:116 (+),score=9.72,XET_C|PF06955.8|5.1e+03,XET_C|PF06955.8|1.9e-19,Glyco_hydro_16|PF00722.17|1.8e-07 R_Transcript_86840:2933-3280(+)
MGIPFPKMQAMKLYSSIWNADQWATQGGRIKTDWSQAPFSSSYRNFKAEACVQVRAKRAATMSCSPAARYTWMTRKLDGTSQDRLNWVRKNFMIYNYCTDTTRFPQALPKECHLM*

Click here to download the sequence:
Link to NCBI Protein BLAST