Transcript Information: R_Transcript_8692.p1


Annotated TAIR IDAT1G25540.1
Annotated Gene Namephytochrome and flowering time regulatory protein (PFT1)
Annotated Gene Symbol(s)PFT1
Annotation TypeOrtholog
Chromosome Positionchr1:8969392-8974446 | Reverse length=836
E-Value1.2E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.443965455341
Replicate 29.6257277531782
Replicate 314.308779301752
Condition 2: 8 Hour
Replicate 113.836887671019
Replicate 216.72420525518
Replicate 322.224409679255
Condition 3: 24 Hour
Replicate 120.000638152667
Replicate 217.259309242626
Replicate 322.221173871878


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8692.p1 GENE.R_Transcript_8692~~R_Transcript_8692.p1 ORF type:3prime_partial len:722 (+),score=160.52,Med25_VWA|PF11265.4|2.8e-42 R_Transcript_8692:216-2378(+)
ATGGCGGATAAACAGTTGATTGTTGTCGTTGAAGGCACTGCTGCGATGGGCTCTTATTGGAACACCATTGTTTCCGATTATCTTGAAAAGATCGTCAGGTCCTTTTGTGGAAATGAATCGCCCTGTCAGACACAGAAGCCTTCTGCTTCAGCTGCTTCTGGTTCAACTTTTGAGCTTGCTCTGGTGATGTTCAATACGCACGGACCTTTTTCTGCTTGCACTGTTCAAAGAAGTGGTTGGACCAGAGATATAGACAATTTTTTGGGGTGGCTTACTTCCCTAACATTTTCGGGTGGTGGTCTGAATGATGTTGCAACCGCCGATGGCCTCTCTGAGGCTTTAATGATGTTTGCTATCCCACAAAATGGATTCCAGACCCAACAAAATTTGGATGGAAAAAGGCATTGCATTCTTATTTCTGCTAGCAACCCTTACCCCTTGCCAACACCAGTCTATCGACCAGCAATTGTAGATTCGGATCACGGTGCAAATGGTGAAGCACAAATCGATAATCTTCTATTTGATTCTGAGACAGTGGCTAAATGGTTCGGTCAGTGTTCTGTGTCTCTGTCAGTTATTTGTCCAAAACAGCTCATGAAGCTTAAGGCAATATATAATGCGGGTAAGCGCAACCAGAGAGCAGCTGATCCTTCTGTCGATGTAAAGCAGCCTCACTTTCTTGTTCTTATATCAGACAGCTTCATGGAGGCCCGTGCTGCTTTAAGTCGGACAGGTTTGGCACCAAGTCAGAACCCTGCAACTTTACCTCCTGGTTCAGGCCCTCCTACTACTTTGCCAGCAGCGAATGGGTCTATCATGAATAGACCTCCAATATCTTCTGGAATTGTTCCTCAAGCGACTGTGAAAGTTGAGCCAAGTACAGTGACTTCTGTGCCACCAGGACCAACTCTTCCTCATATGCCTTCTATGGCTCGTGCTGCTGTTCAAAGTGTGCCCAGCTTACAGGCATCTTCACCTCCTTCTGTGTCTCAGGAGTTGGCTACAAATAATGAGAATATACCAGAGATTAAGCCCATGGTCAGCATGTCGCAGCCTTTGCGCCCTGTAGGTGCCATACTGAACAATCTGTCTCAGGCACGGGTAATGAACTCTGCAGCCCTCACAGGAGGAACTTCTCTAGGTTTGCCTTCAATGGGTTCAAATCCTATTGGTATGCACATGTCAAACATGATATCTAGTGGAATGGCATCTAGTGTACCGCCTTCTCAAACTGTATTGTCTTCTGCACAATCTGGTAACACTGCTGTATCTTGGTCTGGGACCATCCCTGGAACTTCACAGCCGGTACAAAACCCTGCTGTCAATTCATTTTCTTCTGCAACATCTAATGTTTCTGGGAATTCCAACCTAGCCATATCTCAGCCACTGAATAATGTTCAAGGGAATGTGAGTAATACCATGGGTCAACTAGTATCTGCCATTGGTCAGGGAAGTGTCCAGTCAGTGACACAGAGTGTGAATAGTATGAATCCAAACATGATGTCTAACCTTGGGTCCACTGTTGTACCCTCTGGTACTGGTGCTATGATGCCGACACCTGGGATGCAAAGTGTTGGAGTGAACAATACAGCAGCTAATATGCCAATGTCACAGCAAGCTTCGGCTTCATTACCATCATCGCAATCAAAATATGTGAAAGTATGGGAGGGAAATTTATCCGGACAGAGACAAAGGCAACCTGTATTTATCACTAGATTGGAGGGATATAGGAATGCATCTGCTTCAGAAACGCTTGCAGCAAATTGGCCAGCAACCATGCAAATAGTTCGTCTTATATCTCAGGATCACATGAATAACAAGCAATATGTTGGGAAAGCAGATTTTCTTGTTTTCAGGGCTATGAATCAGCACGGGTTTCTGGCACAGCTACAAGAAAAGAAGCTATGTGCAGTAATCCAGTTGCCATCTCAGACACTGCTGCTGTCTGTTTCAGATAAAGCCTGCCGCTTGATAGGAATGCTTTTTCCTGGGGACATGGTTGTTTTCAAACCGCAAATACCAAACCAACCACAACAACAGCTGCAGCACCAGCAACAACAAAATCAGCAGCCACAGCAGCAACAACAACAGCCGCATCCTCAGCTGCAACAACAGCAGATTCAGCATTTGCAACAACAACAGCAAACGATGCAACAGCTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8692.p1 GENE.R_Transcript_8692~~R_Transcript_8692.p1 ORF type:3prime_partial len:722 (+),score=160.52,Med25_VWA|PF11265.4|2.8e-42 R_Transcript_8692:216-2378(+)
MADKQLIVVVEGTAAMGSYWNTIVSDYLEKIVRSFCGNESPCQTQKPSASAASGSTFELALVMFNTHGPFSACTVQRSGWTRDIDNFLGWLTSLTFSGGGLNDVATADGLSEALMMFAIPQNGFQTQQNLDGKRHCILISASNPYPLPTPVYRPAIVDSDHGANGEAQIDNLLFDSETVAKWFGQCSVSLSVICPKQLMKLKAIYNAGKRNQRAADPSVDVKQPHFLVLISDSFMEARAALSRTGLAPSQNPATLPPGSGPPTTLPAANGSIMNRPPISSGIVPQATVKVEPSTVTSVPPGPTLPHMPSMARAAVQSVPSLQASSPPSVSQELATNNENIPEIKPMVSMSQPLRPVGAILNNLSQARVMNSAALTGGTSLGLPSMGSNPIGMHMSNMISSGMASSVPPSQTVLSSAQSGNTAVSWSGTIPGTSQPVQNPAVNSFSSATSNVSGNSNLAISQPLNNVQGNVSNTMGQLVSAIGQGSVQSVTQSVNSMNPNMMSNLGSTVVPSGTGAMMPTPGMQSVGVNNTAANMPMSQQASASLPSSQSKYVKVWEGNLSGQRQRQPVFITRLEGYRNASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLAQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPNQPQQQLQHQQQQNQQPQQQQQQPHPQLQQQQIQHLQQQQQTMQQLQ

Click here to download the sequence:
Link to NCBI Protein BLAST