Transcript Information: R_Transcript_86923.p2


Annotated TAIR IDAT2G17650.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7671041-7672936 | Forward length=603
E-Value9E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4951230816152
Replicate 21.2898751108989
Replicate 31.4854198441191
Condition 2: 8 Hour
Replicate 11.5042510889093
Replicate 21.5263400574188
Replicate 32.7258391375325
Condition 3: 24 Hour
Replicate 11.8021486902293
Replicate 21.7313001859498
Replicate 31.6434454031117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86923.p2 GENE.R_Transcript_86923~~R_Transcript_86923.p2 ORF type:5prime_partial len:293 (+),score=27.84,AMP-binding|PF00501.24|4.5e-35 R_Transcript_86923:3-881(+)
AGCCAACTCTATCCAAATTATCTCTCAAACACTATCTCTCTCTCTCAAATGAACCACTTGTTTAGATTAACTCAACTCTCATCTTATGCCAAGCCCAAACCCACCCAACTCTTTCCTTCCTTGAATGGTAATATTCGATTACTTTTTCTCTCCTCCTATTATTCCTCTTCAGCAACCGAACCGGAACCGGAACCGAAACGTGAACCGGAAGCCGGGTCATGGAAGTCCATAGACGGTCTAATGAGATGTTCAGCCAATTATACTCCGTTGACCCCACTCTCTTTCCTAGACCGGTCCGCTAAGGTGTTTCCGGACCGGACCTCCCTGGTTTACTCCGACTCGACCGGTGCCCGACAAAGTTGGACATGGAAAGAGACTCGTGAGCGCTGCCTCAAGCTGGCTTCCTCTCTCATCCACCATCTTGGGCTTTCTAAAGGCCATGTTGTTGCAGTACTAGCTCCCAATGTGCCTGCTATATATGAGCTGCATTTTGCTGTACCAATGGCAGGGGCAATCCTTTGTGCTCTTAATTCTCGCCTTGATCCAGCCATGGTGTCTGTCCTACTTGATCATTCAGAAGCCAAGGTCCTTTTTGTGGACCATGAACTACTCAAAATTGCGCAAGAAGCGCTTCATCTCTTGTCTAACAAGGGGTCAAAACTTCCATTGCTTGTCCTGATCAATGATTCTGCAGACACACCCGAAAACTTGTCAAACTTAGTGGAGCATGAATATGAAAATCTTCTAGCCAAAGGGGACGACAGCTCCTTTCATGCGATAGGGCCGAGTGATGAGTGGGATCCAATCAGTGTGAATTACACCTCTGGCACAACATCTCGTCCCAAGGGAGTTGTGTACAGTCACAGTGGTGCTACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86923.p2 GENE.R_Transcript_86923~~R_Transcript_86923.p2 ORF type:5prime_partial len:293 (+),score=27.84,AMP-binding|PF00501.24|4.5e-35 R_Transcript_86923:3-881(+)
SQLYPNYLSNTISLSQMNHLFRLTQLSSYAKPKPTQLFPSLNGNIRLLFLSSYYSSSATEPEPEPKREPEAGSWKSIDGLMRCSANYTPLTPLSFLDRSAKVFPDRTSLVYSDSTGARQSWTWKETRERCLKLASSLIHHLGLSKGHVVAVLAPNVPAIYELHFAVPMAGAILCALNSRLDPAMVSVLLDHSEAKVLFVDHELLKIAQEALHLLSNKGSKLPLLVLINDSADTPENLSNLVEHEYENLLAKGDDSSFHAIGPSDEWDPISVNYTSGTTSRPKGVVYSHSGAT*

Click here to download the sequence:
Link to NCBI Protein BLAST