Transcript Information: R_Transcript_86972.p1


Annotated TAIR IDAT3G04870.1
Annotated Gene Namezeta-carotene desaturase
Annotated Gene Symbol(s)ZDS, PDE181, SPC1
Annotation TypeOrtholog
Chromosome Positionchr3:1342842-1346189 | Forward length=558
E-Value4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2351627713719
Replicate 20
Replicate 31.3778488779641
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86972.p1 GENE.R_Transcript_86972~~R_Transcript_86972.p1 ORF type:complete len:133 (+),score=11.03,Amino_oxidase|PF01593.20|5.2e+03,Amino_oxidase|PF01593.20|8.8e-12,NAD_binding_8|PF13450.2|5.2e-11,DAO|PF01266.20|6.8e-06 R_Transcript_86972:358-756(+)
ATGGCGTTATCAGTCTTTTTTCCGGCGAACTCAGCCGCCGGAATTCTTCACCGGCGGTCGGATTCTCGGCAAAACGGTCGCCGTCTTTGTCGTGTGCGGTGCTCCTTAGACAGCCTCGATACTGCTGTTTCCGATATGAGCTCTAACGCTCCAAAGGGATTATTTCCTCCAGAACCTGAACGCTACAAAGGTCCAAAGTTAAAGGTAGCAATTATTGGATCAGGACTTGCCGGCATGTCTACTGCAGTTGAACTTTTGGATCAAGGCCATGAGGTAGATATATATGAATCAAGGCCTTTCATTGGTGGGAAGGTAGGCTCCTTTGTTGATAGACGCGGAAACCACATTGAAATGGGACTTATGTGTTCTTTGGCTGCTATAATAATCTTTTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86972.p1 GENE.R_Transcript_86972~~R_Transcript_86972.p1 ORF type:complete len:133 (+),score=11.03,Amino_oxidase|PF01593.20|5.2e+03,Amino_oxidase|PF01593.20|8.8e-12,NAD_binding_8|PF13450.2|5.2e-11,DAO|PF01266.20|6.8e-06 R_Transcript_86972:358-756(+)
MALSVFFPANSAAGILHRRSDSRQNGRRLCRVRCSLDSLDTAVSDMSSNAPKGLFPPEPERYKGPKLKVAIIGSGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDRRGNHIEMGLMCSLAAIIIFLD*

Click here to download the sequence:
Link to NCBI Protein BLAST