Transcript Information: R_Transcript_86978.p1


Annotated TAIR IDAT3G04870.1
Annotated Gene Namezeta-carotene desaturase
Annotated Gene Symbol(s)ZDS, PDE181, SPC1
Annotation TypeOrtholog
Chromosome Positionchr3:1342842-1346189 | Forward length=558
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.726412287974
Replicate 218.467950104388
Replicate 323.746251539467
Condition 2: 8 Hour
Replicate 118.54601289198
Replicate 223.102342146565
Replicate 325.659344856044
Condition 3: 24 Hour
Replicate 126.884273385322
Replicate 220.053734523544
Replicate 323.721229686847


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_86978.p1 GENE.R_Transcript_86978~~R_Transcript_86978.p1 ORF type:complete len:573 (+),score=81.97,Amino_oxidase|PF01593.20|1.3e-65,NAD_binding_8|PF13450.2|8.2e-15,DAO|PF01266.20|5.7e-05,DAO|PF01266.20|18 R_Transcript_86978:358-2076(+)
ATGGCGTTATCAGTCTTTTTTCCGGCGAACTCAGCCGCCGGAATTCTTCACCGGCGGTCGGATTCTCGGCAAAACGGTCGCCGTCTTTGTCGTGTGCGGTGCTCCTTAGACAGCCTCGATACTGCTGTTTCCGATATGAGCTCTAACGCTCCAAAGGGATTATTTCCTCCAGAACCTGAACGCTACAAAGGTCCAAAGTTAAAGGTAGCAATTATTGGATCAGGACTTGCCGGCATGTCTACTGCAGTTGAACTTTTGGATCAAGGCCATGAGGTAGATATATATGAATCAAGGCCTTTCATTGGTGGGAAGGTAGGCTCCTTTGTTGATAGACGCGGAAACCACATTGAAATGGGACTTCATGTGTTCTTTGGCTGCTATAATAATCTTTTTAGATTGATGAAAAAGGTGGGAGCAGACAAAAACCTGCTTGTGAAGGATCACACTCACACTTTTGTCAATAAAGGAGGGGACATCGGTGAGCTTGACTTCCGGTTTCCAATTGGAGCTCCAATACATGGAATTCGGGCATTTTTGACGACAAATCAGCTCAAGACATATGATAAGGCCAGAAATGCAGTGGCTCTTGCTCTAAGTCCTGTTGTGCGGGCTCTTGTTGATCCAGATGGGGCAATGCAGGATATACGAAACTTAGATAGTATAAGCTTCTCGGACTGGTTTTTGTCAAAAGGTGGCACACGTGCAAGCATCCAGAGAATGTGGGATCCGGTTGCTTATGCCCTTGGGTTTATTGATTCTGATAATATCAGTGCGCGTTGCATGCTCACCATATTCTCATTGTTTGCCACAAAGACAGAAGCTTCATTACTACGGATGCTTAAGGGTTCTCCTGATGTTTATCTGAGTGGGCCCATCAGAAAGTATATCGAAGAGAAAGGGGGAAGATTCCATTTAAGATGGGGATGCAGACAAATTCTTTATGACCGATCTGCTAATGGCGAGACGTATGTGACTGGAATGGCCATCTCTAAGGCTACAACTAGGAAAACCGTGAGAGCTGATGCTTATGTTGCTGCTTGTGATGTTCCCGGTATCAAAAGGTTGTTGCCGGGGGAATGGAGGGACTTGGAAATTTTCGACAATATCTACGAGCTTGTTGGCGTTCCTGTTGTTACGGTTCAACTTAGATACAATGGATGGGTTACAGAAATGCGAGATATACAAAAGTCTAGGCAACTAAAGCAAGCAACAGGATTAGATAATCTCCTGTATACCCCAGATGCAGATTTTTCTTGCTTTGCAGACCTTGCTTTAACATCGCCAGAAGATTACTACATTCCAGGACAAGGCTCCCTCCTACAATGTGTTCTTACACCAGGCGATCCCTATATGCCATTAACTAATGATGAAATCATAAAGAGAGTTTCAGAGCAGGTTTTAAAATTATTCCCATCTTCACGAGGCTTGGAGCTCACTTGGTCATCTGTTGTCAAAATCGGGCAGTCGTTGTACCGTGAGGCTCCTGGCAAAGACCCATTTAGACCTGATCAAAAGACTCCTATTAAAAACTTCTTCCTTGCTGGTTCATACACAAAGCAGGATTATATAGATAGTATGGAGGGAGCCACTCTGTCAGGCCGGCAAGCCTCTGCTTACATTTGTGATGTTGGCGAAGAGCTATTTGCATTGAAAGAGAAGCTCCCAGCTCTTGAATCTCAAGAATCTCCGTCTTCCTCATCCCAGTTAAGTTTTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_86978.p1 GENE.R_Transcript_86978~~R_Transcript_86978.p1 ORF type:complete len:573 (+),score=81.97,Amino_oxidase|PF01593.20|1.3e-65,NAD_binding_8|PF13450.2|8.2e-15,DAO|PF01266.20|5.7e-05,DAO|PF01266.20|18 R_Transcript_86978:358-2076(+)
MALSVFFPANSAAGILHRRSDSRQNGRRLCRVRCSLDSLDTAVSDMSSNAPKGLFPPEPERYKGPKLKVAIIGSGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFVNKGGDIGELDFRFPIGAPIHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGAMQDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDSDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRKYIEEKGGRFHLRWGCRQILYDRSANGETYVTGMAISKATTRKTVRADAYVAACDVPGIKRLLPGEWRDLEIFDNIYELVGVPVVTVQLRYNGWVTEMRDIQKSRQLKQATGLDNLLYTPDADFSCFADLALTSPEDYYIPGQGSLLQCVLTPGDPYMPLTNDEIIKRVSEQVLKLFPSSRGLELTWSSVVKIGQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICDVGEELFALKEKLPALESQESPSSSSQLSFV*

Click here to download the sequence:
Link to NCBI Protein BLAST