Transcript Information: R_Transcript_87073.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeOrtholog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value2E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2414741005794
Replicate 21.4118202004062
Replicate 32.330168134781
Condition 2: 8 Hour
Replicate 11.4775952985407
Replicate 21.3879168039357
Replicate 31.439610497479
Condition 3: 24 Hour
Replicate 11.5832970501865
Replicate 21.292894486689
Replicate 31.8113962499501


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_87073.p1 GENE.R_Transcript_87073~~R_Transcript_87073.p1 ORF type:3prime_partial len:580 (+),score=99.05,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|42,LRR_4|PF12799.3|8.1,LRR_4|PF12799.3|6.3e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|2.7,F-box-like|PF12937.3|3.5e-07,F-box|PF00646.29|3e-06,F-box|PF00646.29|3.4e+03 R_Transcript_87073:159-1895(+)
ATGGAGCCCCAAAACCCAAAACCCAGCCCATCAAAAAAACCCAACAATAACAACAACAGCAACAACTCATTCCCAGAAGAGGTTCTTGAACACGTGCTGTCATTCATAGACTTCCACTCGGACCTCAACTCAGTCTCACTCGTTTGCAAAACCTGGTACGACATCGAACGTTGGTGTCGCCGTAAACTCTTCATAGGAAACTGTTATTCCGTTAGCCCTTCGGTTGTGATTAGAAGGTTTAGAGACCTAAGATCAGTTACTATAAAAGGAAAGCCTCATTTTGCTGATTTTGATTTGGTGCCTGATGGTTGGGGGGCCCATGCTTTGCCTTGGATTTCTGCTTTCTCTCAAGCTTTTCCTGCCCTTCAAGAACTTAGGTTGAAGAGAATGGTTGTCACTGATGAGGGTCTTGAGTTGATTGCTAAAAGGTTTCGGAACTTTAAAGTTTTGGTTCTCGTCTCCTGTGAAGGGTTCTCTACTGATGGCTTGGCCTCTGTTGCTGCTAACTGTGGGAATTTGACGACTCTTGATTTATCCGAGAGTGAAGTTGATGACCTGAGTGGGGATTGGTTAAGTCATTTTCCGGAGTCCTACACGTCATTGGAATCTCTTAACGTTGCCTGCCTGACCAATGAGCCGCCCTTCTCTGTTTTGGAATGCTTGGTCAGCAGGTGTCCAAACCTCAAGTCACTTCGGCTTAATCATGCATTGTCTTTGGAGAAGCTCCTGATTCTCCTGGAGAAGGCACCTCAACTAATCGATATCGGCACAGGCATGTTTTCAACCGATCTCGAAGAAGCATTTTCAAGGCTCACAAAAGCTTTTACAGCATGCAAGGGACTCCGGAGTCTTTGTGGACTGCATGACGCTTCCCCATCTCTTCTTCCAGCTCTATATCCTGTGTGTTCAGGACTCACTTATCTGAACCTGAGTTGTGCGGCCACCATCCAATCCCCTGATTTGATCAAACTGCTAAGTAACTGCTGCAATCTTCAACGCCTTTGGGTTCTTGATTATATTGAAGACAGCGGCCTTGAAAAGCTTGCTGAAAGCTGCAAAGAATTGTGGGAGCTAAGGGTCTTCCCATCTGACCCATTTGCTCTAGAGCCAAATGTTTGCTTGACTGAAGATGGTCTTATTTCTGTCGCGATGGGGTGCCCTAAACTGCAGTCTGTCCTGTACTTCTGTCGTCAGATGTCGAATGAAGCATTGATCACTGTTGCCAAGAATCGGCCAAACTTTACACGATTCCGTTTATGCATCCTCCAGCCTCAGTGCCCTGATTACCTAACTAATCAGCCACTTGATGATGGTTTTGGAGCCATCGTTGAGCACTGCAAGGATCTGAAACGCCTTTCCTTGTCTGGCCTCCTTACTGACCGTGTATTTGAGTACATTGGGAAACATGCCAAGAAGCTCGAGATGCTTTCGTTGGCATTTGCTGGAGATAGTGATTTGGGACTTCATCATCTTCTGTCAGGTTGCAAGAATCTTCGTAAGCTCGAGATCAGGGATTGCCCTTTCGATGGGAAGGCACTCGTGGCAAATGCAGCAAAGCTGGAGATGATGCGATCCCTTTGGATGTCTTCCTGCAAAGTGAGCCATCAAGTGTGTAAAATGCTTGGCAGCAAGATGCCGCGGTTAAATGTCGAGGTGATGGATGTGGATGGAAATCCTGATTCTAGGGCAGATGATTGTCCGGTTGAGAAGCTTTATGTTTACAGGACAGTTGTGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_87073.p1 GENE.R_Transcript_87073~~R_Transcript_87073.p1 ORF type:3prime_partial len:580 (+),score=99.05,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|42,LRR_4|PF12799.3|8.1,LRR_4|PF12799.3|6.3e+03,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|2.7,F-box-like|PF12937.3|3.5e-07,F-box|PF00646.29|3e-06,F-box|PF00646.29|3.4e+03 R_Transcript_87073:159-1895(+)
MEPQNPKPSPSKKPNNNNNSNNSFPEEVLEHVLSFIDFHSDLNSVSLVCKTWYDIERWCRRKLFIGNCYSVSPSVVIRRFRDLRSVTIKGKPHFADFDLVPDGWGAHALPWISAFSQAFPALQELRLKRMVVTDEGLELIAKRFRNFKVLVLVSCEGFSTDGLASVAANCGNLTTLDLSESEVDDLSGDWLSHFPESYTSLESLNVACLTNEPPFSVLECLVSRCPNLKSLRLNHALSLEKLLILLEKAPQLIDIGTGMFSTDLEEAFSRLTKAFTACKGLRSLCGLHDASPSLLPALYPVCSGLTYLNLSCAATIQSPDLIKLLSNCCNLQRLWVLDYIEDSGLEKLAESCKELWELRVFPSDPFALEPNVCLTEDGLISVAMGCPKLQSVLYFCRQMSNEALITVAKNRPNFTRFRLCILQPQCPDYLTNQPLDDGFGAIVEHCKDLKRLSLSGLLTDRVFEYIGKHAKKLEMLSLAFAGDSDLGLHHLLSGCKNLRKLEIRDCPFDGKALVANAAKLEMMRSLWMSSCKVSHQVCKMLGSKMPRLNVEVMDVDGNPDSRADDCPVEKLYVYRTVVG

Click here to download the sequence:
Link to NCBI Protein BLAST